| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1878 |
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| Symbol | |
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| ID | 5104146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1821153 |
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| End bp | 1822091 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507764 |
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| Product | transketolase subunit B |
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| Protein accession | YP_001191942 |
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| Protein GI | 146304626 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCAAG GCAGTTTCTC CTCAATTCGT GAGGCCTTCG GTAAAACCCT GGTTAAACTG
GGGGAGAAGG ACAACGACAT CGTAGTGATT ACTGCTGACG TTGGGGACTC GTCAAGGGCT
TCCTACTTTA AGGAGAAGTT CCCCGACAGG TACTTCAACA TAGGCATCTC TGAGCAGGAC
ATGGTAAACT TCGGCGCCGG TCTCTCGGCT GTGGGTAAGA AGCCCGTGGT GGTGGGATTC
GCCATGTTCC TTATGAGAGC ATGGGAACAG ATGAGGAACA GCATAGGGAG AATGAACCTC
AACGTTAAGG TGTTCGTGAC CCACTCGGGC TACAGCGATA GCGGTGACGG TTCAAGTCAT
CAGGCCCTTG AGGACATCGC GCTCATGAGG GTAATCCCGA ACTTCAAGGT AGTTATACCG
GCTGACGCTG CCGAGGTGGA GAGAAGTATG CCCGTAGTTC TTGAGGACAA GGGACCTCTC
TACTACAGGA TGGGGAGAGA CTATTCTCCT CCGATCACCT CAACCATGGA CTACAAATTC
GAGATAGGTA AGGCATACGT TCTCAGGGAA GGAGATGACG TGGCACTGAT GGGAGCAGGT
GTGGTTCTTT GGGACGCACT AAAGGCTGCT GAGGAACTGG AGAAGATGGG AATAAGCGCG
GCCGTGATTA ACGTACCCAC GGTGAAGCCA ATAGATCAAT CCACAATAGA GTACTACGCG
AGGAAGACGG GGAGGATAGT TACCGTTGAG GAGCACAACG TCATGGGGGG AGTGGGATCA
GCAATAGCTG AGACAGTGGT GAAAACTTAC CCTGTTCCCA TGAGGTTCGT GGGAGCCACA
ACCTATGGTA GGTCGGCGAG GAGCCAGAGG GAACTCCTTG ATTATTACGG TATAACGCCC
AAGACAATCG TGAACTCAGC CCTCGAGTTG ATCAAGTAA
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| Protein sequence | MLQGSFSSIR EAFGKTLVKL GEKDNDIVVI TADVGDSSRA SYFKEKFPDR YFNIGISEQD
MVNFGAGLSA VGKKPVVVGF AMFLMRAWEQ MRNSIGRMNL NVKVFVTHSG YSDSGDGSSH
QALEDIALMR VIPNFKVVIP ADAAEVERSM PVVLEDKGPL YYRMGRDYSP PITSTMDYKF
EIGKAYVLRE GDDVALMGAG VVLWDALKAA EELEKMGISA AVINVPTVKP IDQSTIEYYA
RKTGRIVTVE EHNVMGGVGS AIAETVVKTY PVPMRFVGAT TYGRSARSQR ELLDYYGITP
KTIVNSALEL IK
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