| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1876 |
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| Symbol | |
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| ID | 5104144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1819129 |
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| End bp | 1820121 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640507762 |
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| Product | 3-deoxy-7-phosphoheptulonate synthase |
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| Protein accession | YP_001191940 |
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| Protein GI | 146304624 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCTCT ACATATTGAA GGGCAAGGAT CACTCCTCAC TAAAGGAGAA ACTTAAGTCT
AGCTCAGCCT CATTCAAGTT CCTCAACCTG TACGGAAAGG AGCTCGCACT GGCCTGGCCC
GACTCTGCAG TTGAGGGGAT AACGGATGAA TCCGTGGAGC TAGTGGTGAA GACCAAGAAG
TCCTACATCC TGGCTGGAAA CGAATGGAAA AAGGATCCAA CAGTGGTGAA GGTGAAGGAC
GTGGAGATAG GATCCAAGAG GGTTGTGGTC GCTGCCGGGC CATGTGCGGT GGAGTCCATG
GAGCAGACCG AGACCGTGGC CAAGGCCGTG AAAAGGGCTG GTGCCTCACT ACTCAGGGGT
GGAGCCTACA AGCCTAGGAC GAGCCCCTAC TCCTTCCAGG GACTGGGAGA GGAAGGGCTA
AAGATACTCA GGAAGGCTGG CGACGAGACA GGGTTACCTG TGGTTTCAGA GATCCTTGAC
GCGAGGGACG CGGGAGCCTT TGCAAAGTAT GCTGACATGG TCCAGATAGG CGCTAGGAAC
TCGCAGAACT TCACCCTTTT GCGGGATGTG GGAAAGCTGG GCAAACCCGT CTTGCTAAAG
AGAGGTCTAG GGAACACGGT GGAGGAACTA ATACAGTCTG CGGAATACGT AATGATGGAG
GGGAACGGCA ACGTGGTCCT CTGCGAAAGG GGAATAAGAA CCTTTGAGAA GTCCACCAGG
TTCACCCTAG ATATTGGAGG AATGGTTGCG GGGAAGCTAA TGACGCACCT CCCCTTCTGC
GCGGATCCGA GTCATCCTGC GGGGAAGAGG GAACTGGTTC ACTCCCTTGC CCTAGCCTCT
GTGGCAGCCG GGGCAGACAT GCTCCTTGTG GAAGTTCATC CCAGGCCTGA GGTGGCACTG
AGCGACTCTG AACAGCAACT GACCCCGGAG TCCTTTGAAT TATTGATGGA GAGAGTCAAG
GCATTGGCTT CGGTTCTAGG TAGATCCGCA TGA
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| Protein sequence | MILYILKGKD HSSLKEKLKS SSASFKFLNL YGKELALAWP DSAVEGITDE SVELVVKTKK
SYILAGNEWK KDPTVVKVKD VEIGSKRVVV AAGPCAVESM EQTETVAKAV KRAGASLLRG
GAYKPRTSPY SFQGLGEEGL KILRKAGDET GLPVVSEILD ARDAGAFAKY ADMVQIGARN
SQNFTLLRDV GKLGKPVLLK RGLGNTVEEL IQSAEYVMME GNGNVVLCER GIRTFEKSTR
FTLDIGGMVA GKLMTHLPFC ADPSHPAGKR ELVHSLALAS VAAGADMLLV EVHPRPEVAL
SDSEQQLTPE SFELLMERVK ALASVLGRSA
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