| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1865 |
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| Symbol | rpl10e |
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| ID | 5104133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1809725 |
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| End bp | 1810252 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507751 |
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| Product | 50S ribosomal protein L10e |
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| Protein accession | YP_001191929 |
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| Protein GI | 146304613 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR00279] ribosomal protein L10.e |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.58071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCACTAA GACCAGGAAG ATGCTACAGG CACTTCTCGG GGCCTGCTTA CACTAGGAAA
GAGTATATCC CGGGAGTTCC CCAACCCAAG ATAACTAAGT TCACAATGGG AGACCACAAG
AAGGACTACG ACTTCGAGGT GAGGTTGCTC ACAAAGCAGA TTGGTCAGAT CAGGCATAAC
GCACTTGAAG CGGCTAGGGT CATAGCGCTG AAGCAGATGA CCTCAATGGT GGGAAATGAA
ACCGACTTTT ACCTTTACGT TACCAAGTAC CCGCACCACG TCATAAGGGA GAACAAGATG
ATGGCCTTCG CTGGTGCGGA CAGGCTTCAA GACGGAATGA GGCTGTCCTT CGGAAAGCCC
ATTGGAACTG CAGCCAGGAT TACGAAGCTC GGCGACCTCA TCATGGCAAT AAGGGTGAAG
AAGGAGCACC TCGAGTTCGC AAAGAAGGCC TTTAAGGTTG CCTCGAGCAA GCTCCCGCTC
GACACCGAGA TCGTCGTGGT TCCTCTAAAG GAGGAAAAGA CTCAGTGA
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| Protein sequence | MPLRPGRCYR HFSGPAYTRK EYIPGVPQPK ITKFTMGDHK KDYDFEVRLL TKQIGQIRHN
ALEAARVIAL KQMTSMVGNE TDFYLYVTKY PHHVIRENKM MAFAGADRLQ DGMRLSFGKP
IGTAARITKL GDLIMAIRVK KEHLEFAKKA FKVASSKLPL DTEIVVVPLK EEKTQ
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