Gene Msed_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1846 
Symbol 
ID5104117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1792363 
End bp1793274 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content43% 
IMG OID640507734 
ProductFkbM family methyltransferase 
Protein accessionYP_001191913 
Protein GI146304597 
COG category 
COG ID 
TIGRFAM ID[TIGR01444] methyltransferase, FkbM family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000367724 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTCAA TTCTGATGAC TATTAGGTCG AAATACAACA CTGCCAAGGA AATTTCACGA 
AATCTCCACG TTAGTATGCC AAGCCTTCTC ATTTCCTTTC TCTTAAAACG GAACTTAGAG
GTTAAGCTTG CGGGTTCCAC AATCTCGATT TCACCATTCA ATGCCTACGT GCTGGGCAAT
ATACTCTCAA GGGGATGGAA AGTCACAGGT GTTCAAGGTT ACTTGGTGAC CTTAACCAGC
AGGGATGGAG AAGTAAGTAT AACCTGTAGA ACCAATAAGG GTAATGATCT TGGACATATA
ATGGAGATAT TTTTGGACAA TTCTTACAAC TATGATGTGA GAAATAAAGT TGTTATAGAT
GTTGGGGCAA GCAACGGCGA CTCAAGTATA TTTTTTGCGA AGAGGGGGGC CAAGAGGATT
ATAGCGCTTG AGCCAGATGA GGAGAGTTAC GCCTTAGCCA CAAGGAACGT TGAGGCATCT
CGAGTAGGGG ATCAGGTAAT ACTCCTGAAC AAGGCGTTAT CCTCGCAGAG GGGTAAGATT
ACTCTTTACG TATACGAGAA TAGCGTAAAT GGCAACTCCA TAGATCCACA AAATATGGTC
AAGCTGGGTG AAAGGGTGAT TCCCAAGACA GTGGAAAGCG TGACATTGAC AGAATTATTG
GATATGGCAA AGGATGAGAC TGTGGGTCTG TTGAAGATGG ACTGTGAAGG TTGCGAGTAT
TCTGTGCTGA ACAACCTGGA AAGGGAGGCA TTCGAAAGGA TTGAGGCTAT CTTCATGGAA
TATCACAACG GGTTACAGAA CCTGAAGTCT ATCCTGGAAA GTAACGGATT TCAGGTTGAG
GTTATAGGGG AAAATAATAG AAAAATGGGT TATATACGCG CCAGAAAACT ATCTAGTCCA
TTTCACGGAT GA
 
Protein sequence
MYSILMTIRS KYNTAKEISR NLHVSMPSLL ISFLLKRNLE VKLAGSTISI SPFNAYVLGN 
ILSRGWKVTG VQGYLVTLTS RDGEVSITCR TNKGNDLGHI MEIFLDNSYN YDVRNKVVID
VGASNGDSSI FFAKRGAKRI IALEPDEESY ALATRNVEAS RVGDQVILLN KALSSQRGKI
TLYVYENSVN GNSIDPQNMV KLGERVIPKT VESVTLTELL DMAKDETVGL LKMDCEGCEY
SVLNNLEREA FERIEAIFME YHNGLQNLKS ILESNGFQVE VIGENNRKMG YIRARKLSSP
FHG