| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1828 |
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| Symbol | |
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| ID | 5105390 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1774431 |
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| End bp | 1775154 |
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| Gene Length | 724 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | 640725416 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1662] Transposase and inactivated derivatives, IS1 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.356866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGGGCA AAAGGTAGAG AAAATCAGTT TACAGGGAGA TATCCTGTCC TTCCTGCAGT
GGGAACCACG TGGTTAAGAA GGGTAGGGTA AAGGGAAGGC AGGAGTATCT CTGTAGGAGT
TGCGAGAGGA ATTTCGTCGA GGGGGCCAAG CATCGTTACT ACAAGAGCGT GAGGGAGAGG
GCACTCAAGT CGCAAACTGG ATGAGCATGA GGGCCATCTC CAGGGTACTC CAAGTCCCAC
TTGGGACGGT GTTCACGTGG ATCAAGAGGT ACGGTAAGAA GAAGTGCGCG GAGCTCCTAG
ACCTGTGGAG TGGCGCGAAA GAGGTAGCGG GAGAGGGCGT GAAGGTCGTT GACGAGATGT
GGACCTACGT GAAGAGGAAA ACGAAGGCCT TCTAGGCGTG GGTCTTCGCT TTCCTGTTCT
CGAGGAGGGG CATGTACCTG GCCTTCTCCG TGAGGGAGAG GGGACCTTTC AGGAACTTAG
GCAATACCTA CCCGAGAAGG GAACGTGGGT GAGCGACGAT TACAACGTGT ACTTCCTCCT
ACCCAAGCAC ACAGTCGTGT CCCCCGTGAA CCCCAACGAA TCGCTTCACT CGTCGCTTCG
CGATAGGCTC GTGAGGTTCA AGAGGGCTAC GAAGGCCGTG GATAGGAGCC TTGAAATGAT
GAAGTGCTCA GTTGGGCTCC TCCTGTGGGA ACGCGGTTTA ATCCCGGAAT TTATAACTAT
CTGA
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| Protein sequence | |
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