| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1821 |
|---|
| Symbol | |
|---|
| ID | 5105384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 1767667 |
|---|
| End bp | 1768896 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640507720 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_001191899 |
|---|
| Protein GI | 146304583 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.778953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCCT ATCTGAAGGA CCTGGAAAGG GAGTTCGGCT CGAGATTCAT CTCAAGAGGA
GAGATCATTG ATCAGTACTC AAGTTCCCCC TACCTAGTCT CACCAGTTCT CTCGAAAATG
GGTAAAAGGA TCCTAGGCGT TGTCGTGGCC GAGGACATCG ATGACATCAA GAACCTCCTA
CGCTTCTGTG ACGCCAACAG GATTCCGCTC CTGGCCAGGG GAGCTGGGAC TTCAACCATA
GGCCAGGTAT TACCCATAAC TCCGTGTATT GTCCTGGATA TACAGAGATT AAATAAAACT
CTGGAATACG ACAAATACCT GAGAGTTTCG CCCGGGGTTA AGGTCCTGAC AGCACTCAAC
TACCTCAGGA AGAGGGGCAA GGAGCTCCAG GTCTACCCCA GTAGCTTCTA CATCTCCACC
CTCGGTGGCT ACATAGCTGG AGGAGACGTT GGGATAGGCT CGTATCAGTA CGGCTACCAT
TTCGACCATG ATGGGGTCAG AAGGTTAACT GTGTTGGGGA CCACTGGGAC CTACGAGCTC
AAGGGAAAGG AGACGCTGGC AGTCTCGCAG GCAGCCGGGA CGACAGGCGT GATCGCGGAG
GCCGAGCTCT CGGTAGTGGA TTACGAGGAC TGGAGGGATC AGCTAATCAG GGTTGACGAG
GTGGAAGGAG TAGTGAAGTT GCTCAAGAGA CTCGAGGAGG ACAGGCCTAG GATCAGGAGA
ATAACCTTGG AGGATTACGA GACTCTCTCC TTGATCGCCA AGGGTAGGAT CAACCCAGGA
AAATGGAACG TAATAGTCTC GAGCACCAAG AGCTTTGGGG AAGAGGTTGA CATGAGATTT
CTGGATGAGC TCGCGTTCGC AGCGATTTAC GTTACCATGA GCAAGTTAAC CGGGTTCTCG
AGGTACTTCT ACGAGGTGAG GCTCCTCTCA CTGGAAAGCT TCCTGAAGGT AGTGACGCAG
GTAAAGATGG CCCTTGGTTC TAAGGTTCTA GTTCACGGTG ACGTCATGAC GTTGAGGGGG
GAGACCGTGG TGTACACAGT CTTCATATCG GAAAGGGAAA ACTTTGAGGT AATAGACTCC
ATAATGCTCA AGGAGGGAAT ACCCTTCGAG ATACACTCCC TCGTTGTGAA TGACAGGGTA
GATGAGGAAT TCAGGCTTGA GTTAATGAGG AAATACAAGG AAATCGTGGA CCCTCATAAC
ATCCTGAATC CGGGGAAGTT AAGAGTCTAG
|
|---|
| Protein sequence | MESYLKDLER EFGSRFISRG EIIDQYSSSP YLVSPVLSKM GKRILGVVVA EDIDDIKNLL
RFCDANRIPL LARGAGTSTI GQVLPITPCI VLDIQRLNKT LEYDKYLRVS PGVKVLTALN
YLRKRGKELQ VYPSSFYIST LGGYIAGGDV GIGSYQYGYH FDHDGVRRLT VLGTTGTYEL
KGKETLAVSQ AAGTTGVIAE AELSVVDYED WRDQLIRVDE VEGVVKLLKR LEEDRPRIRR
ITLEDYETLS LIAKGRINPG KWNVIVSSTK SFGEEVDMRF LDELAFAAIY VTMSKLTGFS
RYFYEVRLLS LESFLKVVTQ VKMALGSKVL VHGDVMTLRG ETVVYTVFIS ERENFEVIDS
IMLKEGIPFE IHSLVVNDRV DEEFRLELMR KYKEIVDPHN ILNPGKLRV
|
|---|
| |