| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1819 |
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| Symbol | |
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| ID | 5105382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1765899 |
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| End bp | 1767323 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507718 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001191897 |
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| Protein GI | 146304581 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.757233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAGA AAAAGAAACT GGAAAATGAG GCTCAACCAA GCCTGAAGAA GGACGTGTTG
GGGACGTGGT TAGTGGCAAG TTACGGTATA GCTGCAAACG CTCCCATTGC AGTTGCCACG
CTGTATTTCG TGGGGATTGC TGGTATAGCT GGAGGTGCCA TGCCCCTAGT GGTTCTGCTT
TCCTACCTGA TTTACGCTAC CACACTGATC GTGATATACG AGTGGAGCAA GGACGTGGCT
TCATCTTACG GCTACGTGGC CATCATGAAG AAGGGTCTTA ACAGCAGTTT AGCTGCTTTC
ACCGTGGGAT ACGGTTACAT TTATCAGTAC CTGGTCGCAG GGACTGCCGG TTTCGGCATA
CTCGGCCTAG CTTCCTTCCT TTACTTAATA TCGCCAAGTA TAGCCTCAAC GATGCCGTGG
CTGTGGGCCC TGATCACGGT GATCCTGACG CTCGAGGTTA CCCTTGTAAT GTGGTTGGGC
GTGAAGCCCG GTGGTCTGCT CAACCTCGTG ATAGGTCTAT TTTCCATTGG ATTTCTCGTG
GTAACGTCTA TCTCTCTCAT AGCCGTTGCG GGAAGTCACA ACACCGTAAG CGTGTTCACC
GCATCCCCGG TGAACAACAA CTGGGTTCTA ATACTGGTTT CAATGATCTT TGCGATCACG
ACGTTTGGAG GAGCCACGAC TCCCATAGGC GTTGCCGAAG AGGCCAAGGT ACCAAAGAGA
ACCATGCCCA GGGCACTCCT CCTCGGGTTT GGACTACTTG GAGTGGGGCT AATTCTCAAC
TCCTATGCGC AGACCGTGAT CTACGGAGTG TCCAACATGT TCAACTACGC CTCTCTCCCT
GATCCCATGG TGATCATCTA CAGCAAGTAT TTCAGTCCCG TGATTGTGGA TCTACTAATA
GTACTGGTTG CATTCATGTT CAACTCCTCT ATCATTTCCT TTGCGACCAG CGGTAGCAGA
ATGATATACG GGATGGCAAG GGACGGAATA CTCTATCCAA GCAACTTCTC GAAGGTGAAC
AGGCACGGGG CTCCCGGTAA CGCAATAATA TTGACTGGAG TTATCGCTGG GGCACTTTGC
CTGCTAACCG GTTACCTTCT AGGTCCCCTG GAGGCCAGCA TCTTCCTAAT AACCTTCGGC
TCATTTTACG TTTCTCTCGG GCACCTGTTT GCTGCCTTGG CTCTCATTAG AAGAAAGGTG
AAGCTGGGGA GGCCAGACAT CGCCAAGCAC GTGTTAATCC CCATAATCTC CATGGGCGCT
TACGTGGCTA CGATATACTT CGGAACCTAT CCGGCACCAG CGTTTCCCTT GAACATAGCA
GTGTATTCGG CCTGGGCCGT GTTGGCGGTT CACGTCGTAG TGTATTATTT GATGAAGAGA
AGATATCCGG AAAGGCTAAG CAAGTTCGGG GATCACAGTC TATAG
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| Protein sequence | MDEKKKLENE AQPSLKKDVL GTWLVASYGI AANAPIAVAT LYFVGIAGIA GGAMPLVVLL
SYLIYATTLI VIYEWSKDVA SSYGYVAIMK KGLNSSLAAF TVGYGYIYQY LVAGTAGFGI
LGLASFLYLI SPSIASTMPW LWALITVILT LEVTLVMWLG VKPGGLLNLV IGLFSIGFLV
VTSISLIAVA GSHNTVSVFT ASPVNNNWVL ILVSMIFAIT TFGGATTPIG VAEEAKVPKR
TMPRALLLGF GLLGVGLILN SYAQTVIYGV SNMFNYASLP DPMVIIYSKY FSPVIVDLLI
VLVAFMFNSS IISFATSGSR MIYGMARDGI LYPSNFSKVN RHGAPGNAII LTGVIAGALC
LLTGYLLGPL EASIFLITFG SFYVSLGHLF AALALIRRKV KLGRPDIAKH VLIPIISMGA
YVATIYFGTY PAPAFPLNIA VYSAWAVLAV HVVVYYLMKR RYPERLSKFG DHSL
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