| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1814 |
|---|
| Symbol | |
|---|
| ID | 5105377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 1758763 |
|---|
| End bp | 1759809 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640507713 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_001191892 |
|---|
| Protein GI | 146304576 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.506026 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTA CCCTAGTAAT TCATAGAGTG ACGAAGTCGG TGAGCGGAGA AGGGAACGTG
GTCAGGGCAT CGGCAGAGTT ACTCAAGGAG AAAAAAGTGG ACACCACATT GGCCACATTC
TCTCCTCCCT TGGATGATTT GGGCCTACCC TATTTTTCGG TAGTTCCGTT TAAACTCAGG
CTATTTGACA AGTATCAGAG GGCTTTCACC TATATCTCTG CCAGGAAAAC TAGACCAGAT
TTCTTCCTGA ATATAACAGC AATTCCCATC CCTCTTTCGG ACATAGCCAA ACATATAATC
TATGGCGTAG CGCCTGAATT CTCCTCTGTT CCGTCTAAGT ATAATAGCTC CCTAGTTTGG
AAGCTTTATA TTCTACCTTT GCGTGGTCTC CTTAAAAGAT TCAGGGAAGA GGCTCAAAGA
TCTGTGTTCA TAGCTAATTC CCGTTACTCC TCCAAGGCAA TAAGAGAAAT CTATGGAGTA
GATTCTGAGG TGGTGTATCC TCCGGTGGAT GTTACAGATT TCCTTAAGGC GTATCATGAG
GAGGGAGAAC CCTTCTTCCT GACTATCGGA AGATTTGAGC CCGGGAAGAG ACTAGACCTC
GCGGTGCGCC TATCCGCTAT GACAGGGATA AGGGGGGTGA TTGTGGGTTC CATGGAAAGC
GATAGTTATC TGAAAAGGCT GGTTAAGTTA AGTAAGGAGC TTAAGGCAGA CGTTCAATTC
CTTCCTAACG CGAAAAGGGA ACACCTCATA GAGGTGATGA AAAGGGCCTC TATCTACTTC
CATCCCACCC TTGGGGAACA CTTCGGTATA CCCATTGTTG AGGCCATGGC TGCAGGCCTT
GTTCCCATAG TTCCCAGGGA GAGCGGAGGA TTTGAGATAG TACCCGAGTT TAGTTATGAT
AGCCTTGAGG AGGCATCTGA ACTAGTGAAA AATAACCTTA AGGCTCCTAG TTCCGTCAGG
AGAGATCTAA GGGAGAAGGC GCTAGGTTTT GACAGGAGGA TATTTAAGGA GAGAATGTGG
AATGTAATTG AGAGAGCCAT AACCTAG
|
|---|
| Protein sequence | MKSTLVIHRV TKSVSGEGNV VRASAELLKE KKVDTTLATF SPPLDDLGLP YFSVVPFKLR
LFDKYQRAFT YISARKTRPD FFLNITAIPI PLSDIAKHII YGVAPEFSSV PSKYNSSLVW
KLYILPLRGL LKRFREEAQR SVFIANSRYS SKAIREIYGV DSEVVYPPVD VTDFLKAYHE
EGEPFFLTIG RFEPGKRLDL AVRLSAMTGI RGVIVGSMES DSYLKRLVKL SKELKADVQF
LPNAKREHLI EVMKRASIYF HPTLGEHFGI PIVEAMAAGL VPIVPRESGG FEIVPEFSYD
SLEEASELVK NNLKAPSSVR RDLREKALGF DRRIFKERMW NVIERAIT
|
|---|
| |