| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1793 |
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| Symbol | |
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| ID | 5105357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1732965 |
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| End bp | 1733927 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640507692 |
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| Product | DNA primase small subunit |
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| Protein accession | YP_001191872 |
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| Protein GI | 146304556 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1467] Eukaryotic-type DNA primase, catalytic (small) subunit |
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| TIGRFAM ID | [TIGR00335] DNA primase, eukaryotic-type, small subunit, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTTCTA TATTGCCCCC AGGGCAGAAT AGGATAGTCA GGTCTCTGAT CAGGAGCTAT
TACGAGAGGG CAGAGCTATA TCTCCCCTTC GACATGGAGT TGAGGGAGTT CGCCTTTCAA
CCGCTCTCAG GAGGCAGTTA CGTTAGGCAT CTCTCCTTCC AAACTGCCCA GGAGTTGAGG
GAGGTGTTGT TGAGGGAGGT CCCAGGTCAC GTCTTCTACT CCTCTGCCAA GTATCAGAGA
CCCTCAGCCA GGGACATGGA GGAGAAGGGT TGGATGGGGT CAGATCTCCA GTTCGATCTA
GATGCTGACC ATCTATGCGA GCCCAGGAAG ATCACCTTCT GTCCCGTCTG CGGAAAGGAG
GTTATGGGCG AAAGGTGTCC AGATCACGAC GTGGAGGCGA GGGAGTACGT GGAGATTCCC
TTGGACTGTC TAAGGAAGAC CTGGGACCAG GCTGTGCTTC TCTCCAGGAT ATTGAAGGAG
GACTTTGACC TGAGCCCCAG GATCTTCTTC TCAGGGAACA GGGGCTTTCA CGTGCTCGTG
GAGTGCAGTG GAGATTGCGC ACTCATGGAC TCAGACGACA GGAAGGAGAT TGTGAGGTAC
GTCATGAGGG ACCAGGTTCC CTTCAGGGGT GTTGAGGGGG ATCCTGGGTG GGCCGGAAGG
CAGGAAGGAG GGGTTAGCGT GGACGAACAG GTTACCGTGG ATGTGCACAG GCTCGTGAGA
ATTCCAGGGT CAATCCACGG AAAGAGTTCC CTCCTCGTTA AGGAGATGAA CGATTTCCTC
TACGATATAT CCCTTTCCCC CTTCTCGGGA AAGGCGGTCC TCCTCCCCTT CATTACAGGG
GACTTCCTCC TAGTGGACAG GCAGTTTCAC CTGAACAAGG GGGAGCCAGT TTCCATGGAG
GCCGGTTACG CGGTCTTCGC ATACCTCAAG GGCTTGGGTG AGGTGACCTA TTACGTTAGA
TGA
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| Protein sequence | MTSILPPGQN RIVRSLIRSY YERAELYLPF DMELREFAFQ PLSGGSYVRH LSFQTAQELR
EVLLREVPGH VFYSSAKYQR PSARDMEEKG WMGSDLQFDL DADHLCEPRK ITFCPVCGKE
VMGERCPDHD VEAREYVEIP LDCLRKTWDQ AVLLSRILKE DFDLSPRIFF SGNRGFHVLV
ECSGDCALMD SDDRKEIVRY VMRDQVPFRG VEGDPGWAGR QEGGVSVDEQ VTVDVHRLVR
IPGSIHGKSS LLVKEMNDFL YDISLSPFSG KAVLLPFITG DFLLVDRQFH LNKGEPVSME
AGYAVFAYLK GLGEVTYYVR
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