Gene Msed_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1791 
Symbol 
ID5105355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1731451 
End bp1732215 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content53% 
IMG OID640507690 
ProductGTPase 
Protein accessionYP_001191870 
Protein GI146304554 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTACG TGTTCTTCAC AGGAACTGCC GGCTCAGGGA AGACCACCAT GGTGAAGGAG 
TTCCAGGAAT ACCTCCTTGA CCAGGAAATG GACGTTGCCG TGGTCAACAT GGACCCTGCA
GTGGAGAGGC TTCCCTACAC CCCGGACTTT GACGTAAGGG ATTACGTTGA TGCCATGGAG
GTAATGGAGA GATATGGCCT GGGTCCCAAC TCATCCCTCA TAGTCTCCGT GGACCTCCTC
CTCACCAAGG CAACGGAGAT AAAGAACGAC ATTGGGAACA TAGAGGCCAA TTACGTTCTC
GTGGACACCC CAGGTCAGGT AGAACTCTTC GCGTACAGGG ACACCGGGAG GACCTTCTCG
TCCCTACTGG TGGGGGACAG CAAAAGCGTC AACGTGTTCC TCCTGGATGC GTTTCTGGCC
AGGGATGCCA GGAGTTACGT GTCTCTCCTT CTTCTCTCCA GTTCAGTTAG GTTCAAGTTG
GGAATTCCAC AGCTGAACGT TCTCTCCAAG ATTGACTTGA TCTCCAAGGA TGAATTGAAT
AACCTCCTTG AGTGGGGCCA GGGAGAGGGA CTCATGGACA GCCTGGGAGT CATAGATGAT
TATTCCTTTG AGCTAGTGAA GACACTCGTG GAGAGCCTGG AGGTACCCCC CATACCCGTT
TCCTCACCAA GTAGGCAGGG ATTCGATGAG TTATACGCTG AACTCCAGAG GGTTCTAGCT
GGAGGAGAGG ACTACGCCAC AGAGGAGAAC AATAGCAGAC TGTAG
 
Protein sequence
MYYVFFTGTA GSGKTTMVKE FQEYLLDQEM DVAVVNMDPA VERLPYTPDF DVRDYVDAME 
VMERYGLGPN SSLIVSVDLL LTKATEIKND IGNIEANYVL VDTPGQVELF AYRDTGRTFS
SLLVGDSKSV NVFLLDAFLA RDARSYVSLL LLSSSVRFKL GIPQLNVLSK IDLISKDELN
NLLEWGQGEG LMDSLGVIDD YSFELVKTLV ESLEVPPIPV SSPSRQGFDE LYAELQRVLA
GGEDYATEEN NSRL