Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1791 |
Symbol | |
ID | 5105355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1731451 |
End bp | 1732215 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640507690 |
Product | GTPase |
Protein accession | YP_001191870 |
Protein GI | 146304554 |
COG category | [R] General function prediction only |
COG ID | [COG1100] GTPase SAR1 and related small G proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATTACG TGTTCTTCAC AGGAACTGCC GGCTCAGGGA AGACCACCAT GGTGAAGGAG TTCCAGGAAT ACCTCCTTGA CCAGGAAATG GACGTTGCCG TGGTCAACAT GGACCCTGCA GTGGAGAGGC TTCCCTACAC CCCGGACTTT GACGTAAGGG ATTACGTTGA TGCCATGGAG GTAATGGAGA GATATGGCCT GGGTCCCAAC TCATCCCTCA TAGTCTCCGT GGACCTCCTC CTCACCAAGG CAACGGAGAT AAAGAACGAC ATTGGGAACA TAGAGGCCAA TTACGTTCTC GTGGACACCC CAGGTCAGGT AGAACTCTTC GCGTACAGGG ACACCGGGAG GACCTTCTCG TCCCTACTGG TGGGGGACAG CAAAAGCGTC AACGTGTTCC TCCTGGATGC GTTTCTGGCC AGGGATGCCA GGAGTTACGT GTCTCTCCTT CTTCTCTCCA GTTCAGTTAG GTTCAAGTTG GGAATTCCAC AGCTGAACGT TCTCTCCAAG ATTGACTTGA TCTCCAAGGA TGAATTGAAT AACCTCCTTG AGTGGGGCCA GGGAGAGGGA CTCATGGACA GCCTGGGAGT CATAGATGAT TATTCCTTTG AGCTAGTGAA GACACTCGTG GAGAGCCTGG AGGTACCCCC CATACCCGTT TCCTCACCAA GTAGGCAGGG ATTCGATGAG TTATACGCTG AACTCCAGAG GGTTCTAGCT GGAGGAGAGG ACTACGCCAC AGAGGAGAAC AATAGCAGAC TGTAG
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Protein sequence | MYYVFFTGTA GSGKTTMVKE FQEYLLDQEM DVAVVNMDPA VERLPYTPDF DVRDYVDAME VMERYGLGPN SSLIVSVDLL LTKATEIKND IGNIEANYVL VDTPGQVELF AYRDTGRTFS SLLVGDSKSV NVFLLDAFLA RDARSYVSLL LLSSSVRFKL GIPQLNVLSK IDLISKDELN NLLEWGQGEG LMDSLGVIDD YSFELVKTLV ESLEVPPIPV SSPSRQGFDE LYAELQRVLA GGEDYATEEN NSRL
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