| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1790 |
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| Symbol | |
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| ID | 5105354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1730527 |
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| End bp | 1731399 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640507689 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_001191869 |
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| Protein GI | 146304553 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATTG TAGGAGGTAC TGCGACGAAC GGGATCGACG AAAGGCTATC CAAGTTACTG
GGAGCCAGGC TGATCAAGGT TGAACACAAG GTTTTCCCAG ACGGGGAGTC CTACGTTAGG
ATTCCTTCCT CCCTCTCAGG TGAGGAGGTT GTCCTAGTCC AGACAACTCA ACCACCGCAG
GATAAGAACC TCATGGAACT TTTCTTAATG GTCGAGGCCC TAAGGGACGT GGGGGCATCC
AGGGTGACGG CCGTTGTGCC CTACATAGCC TATTCCAGGC AAGACAGGAG ATTCCTTGAT
GGAGAGGCAA TAAGCATAAA GACAGTGCTC AACGTCATGC GTTCCCTGGG TGTCTCAACC
CTGGTCACAG TGGAACCACA TCATCAAGAG TCCCTGGACT ATTTTGGGGG AGAGGTGAGG
GTGGTGGATC CCATCCCCTC CTTGGCGAAG GAGGTGAGAA GGTTCGTTAA GAACCCCTTT
GTCCTAGGCC CAGATAGGGG AGCCATGGGG AGGGCCGAGA GACTCGCTAA GGAACTAGGA
TGCAGGTACT CCTTTCTGGA AAAGGAGAGG GATAGGCACA CCGGGGAGAT TAGGGTTAGA
GCAGGAAACC TAGGGTCGCT GAAGGGTTAC GACGTTGTCC TCGTGGACGA CATAATCAGC
ACCGGTGGAA CGCTGGTAGA GGCAACCAAG ATAGCCCAAT CTCTGGGTGC TGAAACCGTG
AGTGCCGCTG CCGTTCACCT CCTGCTGGTT AACGGGGCAT ACAACAGGTT AAGGGAGGCA
GGGATCAAGG AGATCGTCGG AGTTAACACC GTGGTTCCAA GGGAAAAGGT TAACCTAGTG
GATATATCGG ATCAGATAGC CGTGAAGCTA TGA
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| Protein sequence | MIIVGGTATN GIDERLSKLL GARLIKVEHK VFPDGESYVR IPSSLSGEEV VLVQTTQPPQ
DKNLMELFLM VEALRDVGAS RVTAVVPYIA YSRQDRRFLD GEAISIKTVL NVMRSLGVST
LVTVEPHHQE SLDYFGGEVR VVDPIPSLAK EVRRFVKNPF VLGPDRGAMG RAERLAKELG
CRYSFLEKER DRHTGEIRVR AGNLGSLKGY DVVLVDDIIS TGGTLVEATK IAQSLGAETV
SAAAVHLLLV NGAYNRLREA GIKEIVGVNT VVPREKVNLV DISDQIAVKL
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