| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1773 |
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| Symbol | |
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| ID | 5104773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1715483 |
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| End bp | 1716094 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507671 |
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| Product | bacterio-opsin activator |
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| Protein accession | YP_001191852 |
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| Protein GI | 146304536 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0180181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATTT CAGTCCAACA TGAGGGTTGT TGGACTAGTA ATTTGGGCGA TGTTGATGCG
AGCACCGTGA ACTACCAAGT TTATCCGGAA AGGGATTACC TTAGGTCAAG GATAACGGTT
TACCCTAAGG ATAAATCCGT GGTCTTGAGA ATGAAGAGGT CTAGGGGAGT GCTTAAGATT
AACAAGGCAA CCTCGTACGG CGATGTGTAC TTTGTGGACT TTCTTAACAG GTACAGGGAT
TCCCTAGCCG GTTGGCTATA TGATAAGGAG GTAATGTTCC TGTTTAATAG GATCTGGAGG
GGAACTGAAA CCTGGGGCTT CGTGATTCCC AGGGACAGGG TATCTGAGAT ATTGGGTGAA
GTTTCCTCCT ATGGTAAACT GGTGAACTAC ACGCTGGAGG ACTTCAAGCT CAACCTTGGC
CCTAGACTAT CTCCCGCGGA AAGGCGGGCG TTAAAGACTG CCTTTTCCAG GGGATACCTA
GACTATCCAA GGAAGGCAGA TGCGGACACG GTAGCCATGG AGTTGGGTCT CAGCAAGGTC
ACCTTCCTCC ATCACCTGAG GAACGCGTAT AGGAAGTTGA CGGTACATTA CCTTAACTCG
GACTTGAGCT AG
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| Protein sequence | MTISVQHEGC WTSNLGDVDA STVNYQVYPE RDYLRSRITV YPKDKSVVLR MKRSRGVLKI
NKATSYGDVY FVDFLNRYRD SLAGWLYDKE VMFLFNRIWR GTETWGFVIP RDRVSEILGE
VSSYGKLVNY TLEDFKLNLG PRLSPAERRA LKTAFSRGYL DYPRKADADT VAMELGLSKV
TFLHHLRNAY RKLTVHYLNS DLS
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