Gene Msed_1741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1741 
Symbol 
ID5105104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1676390 
End bp1676713 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content43% 
IMG OID640507636 
ProductCutA1 divalent ion tolerance protein 
Protein accessionYP_001191820 
Protein GI146304504 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1324] Uncharacterized protein involved in tolerance to divalent cations 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.894466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGAA AGTATGTCCT TGTGATCAGT ACATTACCAG GCATGGAGGA AGGAAAAAGA 
ATTGCCAGGA CCTTAGTTGA GGAAAAGTTA GCAGCGTGCG TTAACCTAGT TCCAGGCTTA
GTCTCCATTT ACAGATGGGA GGGGAAGGTT ACAGAGGATA GCGAGGTTTT GGCACTAATA
AAGACCAACT CTGACAGACT AGACGAGCTA ATGAATAGAC TCAAGGAACT TCACCCCTAT
AAAGTTCCGG AGATTCTAGC CTTGGATATA AAGAATGGTT TTAAGTTATA TCTGGACTGG
ATAGATGAGA GTGTTTCCAA GTGA
 
Protein sequence
MTGKYVLVIS TLPGMEEGKR IARTLVEEKL AACVNLVPGL VSIYRWEGKV TEDSEVLALI 
KTNSDRLDEL MNRLKELHPY KVPEILALDI KNGFKLYLDW IDESVSK