| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1740 |
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| Symbol | gatC |
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| ID | 5105103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1676100 |
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| End bp | 1676393 |
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| Gene Length | 294 bp |
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| Protein Length | 97 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507635 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit C |
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| Protein accession | YP_001191819 |
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| Protein GI | 146304503 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
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| TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.857135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGGTTC AGGTTGACGA AGAACTTATG AGGAAACTTG AGAAGCTGGC CTTGATCTCC
CTAACAGATC AAGAAAGGCA GGAATTCATG AGGGATTTGA CTAAGATCCT TGATTTCTTC
AACAAGATAG ACGAACTAAA CCTTGAGGGC GTGGAGCCCA TGTTCCATCC ACTCTCCACA
GGTAAACTGA GACCGGATGA GCCGGCCCAA CCCCTCTCCA GGGATGACGC CCTAGCTAAT
GTGCCCAAGA AAAAGGATGG TTACATTATA GGTCCTAGCA CCATAGGTGG GTAA
|
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| Protein sequence | MKVQVDEELM RKLEKLALIS LTDQERQEFM RDLTKILDFF NKIDELNLEG VEPMFHPLST
GKLRPDEPAQ PLSRDDALAN VPKKKDGYII GPSTIGG
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