| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1733 |
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| Symbol | |
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| ID | 5105096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1669782 |
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| End bp | 1670666 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507628 |
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| Product | transcription initiation factor IIB |
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| Protein accession | YP_001191812 |
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| Protein GI | 146304496 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.278852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.98163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGCC CCATTTGTGA GGGTACTGAG ATAATATATG ATGCCGAGCA TGGTAACTAC
GTTTGTGCCA GGGATGGAAC TGTAATTGAA GAAAACGTGC CAGATCCTGG CCCTGAGTGG
AGAGAGTTCG ATGCAGGCGA TAGGAACAAG AAGAGAAGGG TAGGAGCTGG GATCACAGAT
AGGGTACATG ACAAAGGATT TTCCACCATT ATTGGAGGTG GAAGAGTAAA GGATAAAATG
AAGGCAATAA GGCTTCAGAG ACTTCAAAAT AAGTCAAGGG TTACATCAAA GGACAAGAAA
CTAGTTACGT ATCTATCGAT ACTCAACAGC GAGGCATCGA AGTTGGGACT ACCTGGATAC
GTTAAGGAGA CGGCTGCCGG GGTCATAAAG AAGTTGATCG AATCGGGTCT CGCGAGGAGG
ATTGATACGT ACGCACTAAT TGCAGCGACG TTATTCTATG TTAGCAGACT GTACAAGATC
CCACTCCAGT TGAATGAGAT AAAGAAGCTT TTCAACATAG ACTCAAGCGC CTTCTGGAAA
GCCTCAACCA GAGTCCAGAA CGTTATACAG AAGAGTACGT TCATGTCTAA CTTTGGAGGA
CCTTCTCCAC TGGAACACAT ACCAGATATC GTTAACAGGG CTAAGTTACC TCCCCATGTG
GAAACCATGG CCGCAGAAAT AGCGTCGATC CTGATAAAGA ACGCAATAAC CAGCGGGAAG
GGCCACTTAT CTGTTGCCGC GGCGGCAGTC TACTTGGCCA GCACCATATT GGATCACAAG
AAGACGCAGA AAGAACTTGC AGAGGTTCTG AACATCACCG AGGTTACCAT AAGAAATAGA
TATAAGGAGA TAGTAAACTC ACTTGACGTC GAGGTCAAAC TGTGA
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| Protein sequence | MKCPICEGTE IIYDAEHGNY VCARDGTVIE ENVPDPGPEW REFDAGDRNK KRRVGAGITD
RVHDKGFSTI IGGGRVKDKM KAIRLQRLQN KSRVTSKDKK LVTYLSILNS EASKLGLPGY
VKETAAGVIK KLIESGLARR IDTYALIAAT LFYVSRLYKI PLQLNEIKKL FNIDSSAFWK
ASTRVQNVIQ KSTFMSNFGG PSPLEHIPDI VNRAKLPPHV ETMAAEIASI LIKNAITSGK
GHLSVAAAAV YLASTILDHK KTQKELAEVL NITEVTIRNR YKEIVNSLDV EVKL
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