| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1726 |
|---|
| Symbol | |
|---|
| ID | 5105089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 1664402 |
|---|
| End bp | 1665550 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640507621 |
|---|
| Product | N(2),N(2)-dimethylguanosine tRNA methyltransferase |
|---|
| Protein accession | YP_001191805 |
|---|
| Protein GI | 146304489 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1867] N2,N2-dimethylguanosine tRNA methyltransferase |
|---|
| TIGRFAM ID | [TIGR00308] tRNA(guanine-26,N2-N2) methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAA CAGAAGTGAT TGAGGGAAAG GCAAGATTAG TTATTCCAGA CCCTTCTGAA
TTCTCCAGAG AGGGAAAGTT CGATCCTGCC TGGTCTCCAG TATTCTATAA CCCCAGAATG
GTGTTTAATA GGGACGTCAG TGTTTTGGCT GTCTCAGTTA TATCTCCTCC CTCGGTATTG
GACGCCATGT CAGCCACTGG GGTTAGGGGA ATCAGGTACG TGAAGGAGAG TGGGGTCAAG
GGAGAAGTTC TCTTCAATGA TAAGAATCCA GTGTCCGTGG AGTTGATCTC GAAGAATTTA
GAGCTAAACG GGATTACAGG TAAGGTACTT AGATCGGACG CTAACTCCTT AATGCATCAG
GTAAAAGTAG GCTACACAGA CCTGGATCCC TTTGGATCTC CTGCCCCATA TCTTTTCTCA
GCCATTTCAT CCTTGAGAAG GAAAGGGGTA CTGGGAGTTA CTGCTACTGA CCTATCAGCA
CTTGAGGGAA AGTCTAGAAC CTCCTCCAAA AGGAAATATG GAGTTCAAGG GAGTAGATTG
AGTTATTCCA AGGAGGCTGG GTTGAGGGTT CTATTGGGTA AGATAGTTAA AGAGGCATCA
GTCCAAGAAA AGGGAATAAG GCCCCTCATG GGCTTTTATC ACGACTACTA TTACAGGCTA
TTCGTTAAGA TGGAGGATGG AGCCAAGAGG GCTGATAGAA GCCTGGAAAG TCTCGGAACT
CTTTACGAAT GTGATAGATG TGGCTATTCC TTCATGAGTT CAGATGAATG CGAAAGGAAA
TGCCCGGTCT GTGGTGGAGA GCTTAAGTAT TATGGTCCAG CCTGGATTGG AGAATTCAAT
GATCTAGAAT TTTTAAAGGA AATGAAAAAT AGACTTACTG AGTTTTCGTA TCTCTCAAAC
TCAGTAAAAA TATCTGAACT CTTAGAATAC CTAGAGCGTG AAAATAGATT TGGCCCCTAT
TATAGGGTAG ACGTTTTAGC ATCAAGGCTC AAGGTAAACA TGCCCCCCAT GAACTCACTC
CTAGGGTGTT TGGGCGACGC TGTCAGGACG CACTTTGATC CTAGGGGATT TAAGTCTTTC
AGGGAATTCT CTGAAATATT GGAATGTGTG AAGGGATCCT CCGCGACTTA TGAAACAAGT
GGTAGATAA
|
|---|
| Protein sequence | MKLTEVIEGK ARLVIPDPSE FSREGKFDPA WSPVFYNPRM VFNRDVSVLA VSVISPPSVL
DAMSATGVRG IRYVKESGVK GEVLFNDKNP VSVELISKNL ELNGITGKVL RSDANSLMHQ
VKVGYTDLDP FGSPAPYLFS AISSLRRKGV LGVTATDLSA LEGKSRTSSK RKYGVQGSRL
SYSKEAGLRV LLGKIVKEAS VQEKGIRPLM GFYHDYYYRL FVKMEDGAKR ADRSLESLGT
LYECDRCGYS FMSSDECERK CPVCGGELKY YGPAWIGEFN DLEFLKEMKN RLTEFSYLSN
SVKISELLEY LERENRFGPY YRVDVLASRL KVNMPPMNSL LGCLGDAVRT HFDPRGFKSF
REFSEILECV KGSSATYETS GR
|
|---|
| |