| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1722 |
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| Symbol | |
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| ID | 5105085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1661163 |
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| End bp | 1662392 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507617 |
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| Product | C/D box methylation guide ribonucleoprotein complex aNOP56 subunit |
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| Protein accession | YP_001191801 |
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| Protein GI | 146304485 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT ATTTGGCTGA GCACACAATA GGGTCCTTTG CCTTTGATGA GTCAGGGAAC
CTTTTGGATT ACGTCCTTAA TCCAAAGGAA CTGGGCAAGG TAGTTGATAT TCTAATAAAC
GCCGAGAAAG GTGAACCAAT GCCCTCTACC ATGGAATTAA TTCAGAAACT GAAACCGTCG
GAAGTAGTTG TGGAAAGCGA AACGGAGAGC TCAAGGATGC AGACCTTAGG GATCAAGGTT
GTATCCAAGC CCCATCATGT GGGAGCCAGG GCTTTGAGGG GTTCTCTCGC TGAACTAGCA
GTAAAAACAA AATTCGCTGA AAATCCGAGC GAAGTGTACA ATTTCCTTTA TCAAGTATCT
CTAGAATATA CGAGAAGAAA GCTGAGAAAG GCCGCCCAGA AAAGGGACCT TCTCGCCATA
CAGGCCATAA GGGCTATCGA CGATATTGAT AAGACCATTA ACCTTTTCTC CGAAAGATTA
AGGGAGTGGT ATAGTATACA CTTCCCCGAA GCCGATAAAC TGGTTGAGGA CCATGAACAA
TACGCCAAAA TAGTTTCCCT GGCTGGTTAT AGGGATAATG TAACGGTGGA GACGTTAACC
GAGATAGGAC TTAATGAGCA AAGGGCTAAG AAGCTAGCCG ATGCTGCCAA GAAGAGTATA
GGAGCAGACA TCTCAGATGC GGATATCAAC TCCATCAGGG ATCTGGCTAA CACGATTTTG
TCTCTTTTCA AGCTAAGGAA CTCGCTTTAC GACTACTTGG ACTCAATTAT GAGGGAAGTA
GCTCCCAACG TGACTGAACT AGTGGGTCCC ACCCTTGGTG CTAGGCTGTT AAGTCTGGCA
GGGAGCCTTG AGGAACTTTC TAAGATGCCA GCTAGTACGA TTCAAGTGTT AGGGGCTGAG
AAAGCCCTCT TTAGGGCACT TAAGAGCGGA AGCAGACCAC CCAAACATGG AATCATTTTC
CAGTATCCAG CAATTCACGT CTCTCCCAGA TGGCAGAGAG GGAAGATTGC CAGGGCCCTA
GCTGCCAAGC TAGCAATAGC ATCAAGGATA GACGCCTATA GCGGAAGATT TGTGGGAACA
CAGCTTGTGG AACAGGTGAA TAAGAGAATC GAGGAGATAA AAACGAAATA TGCCCAGCCA
CCACCCAAAA AACAACAACC AGCTAAGGAA GAGGGGAAGA GATTTGATAA AAGAGAGCAT
AAAAAGGGGA AAAAGGGAAA GAGAAGGTAG
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| Protein sequence | MKIYLAEHTI GSFAFDESGN LLDYVLNPKE LGKVVDILIN AEKGEPMPST MELIQKLKPS
EVVVESETES SRMQTLGIKV VSKPHHVGAR ALRGSLAELA VKTKFAENPS EVYNFLYQVS
LEYTRRKLRK AAQKRDLLAI QAIRAIDDID KTINLFSERL REWYSIHFPE ADKLVEDHEQ
YAKIVSLAGY RDNVTVETLT EIGLNEQRAK KLADAAKKSI GADISDADIN SIRDLANTIL
SLFKLRNSLY DYLDSIMREV APNVTELVGP TLGARLLSLA GSLEELSKMP ASTIQVLGAE
KALFRALKSG SRPPKHGIIF QYPAIHVSPR WQRGKIARAL AAKLAIASRI DAYSGRFVGT
QLVEQVNKRI EEIKTKYAQP PPKKQQPAKE EGKRFDKREH KKGKKGKRR
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