| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1716 |
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| Symbol | |
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| ID | 5104170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1653641 |
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| End bp | 1656112 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507611 |
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| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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| Protein accession | YP_001191795 |
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| Protein GI | 146304479 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.387668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGTG ACATCAGTAT ACTATCTCTC TCTAAGATAT CAGTCATAAA GCGTGACGGT
AGGAGGGAAG AATTTAAACT AGAAAAGATC CTCTCAAAAC TCGGTCCACT ACATGACGAG
ATAGTGGACG GTATTGCAAA GGATGTGATT CAAAACTCTA CTGATAACGT GATAAATACT
AGATCGTTAG CTGATATCGT GGAGAGGAAC CTCATTGAGG GTTCCTTGGA ACACCCAGAG
CTCATGGATC TGGCCAAAAA GTACGTTCTG GCCAGAATCT ACAATCACGT ATTTGGAAAG
GGTAAATGGA GCGAGTTTGA TCCCAAGGAT CTACTCATTA GCTATAACGC CCTCAAGGTG
TTAGAGGCTA GGTACCTGTT GAAGGATCCC GAAACTCTTA GGTACATTGA GACGCCTCAG
ATGATGTTCA AGAGAGTCGC CTCGTATCTG GCTAAAGTCG AGCAGGATAA GAACGTTCAG
CAGGATGCTG CGCAGAAATT CTATGAGATA ATGTCCTCTC TCAAGTTCGT GCCCAACACC
CCTGCCCTGA TGAACTCCGG AACTAGGCTC GGTATACTCT CAGCGTGTTT CGTTCTACCG
GTTAGGGATT CCATGACTTC CCCCTCAGGT GACGGTATAT ATGACACTCT CAGGGCGATG
GCACTGGTTC ACCAACAGGG AGGAGGCACG GGATTCGACT TCTCTGAACT TAGACCTAAG
GGAGATGTTG TAGCGTCTAC TGCGGGAGTT GCCTCTGGTC CGGTCTCCTT CATGAAGATC
TTTGATGTTT CAACTGACGT TGTGAAACAG GGCGGTAAGA GACGTGGTGC GAACATGGGT
GTCATGCATG CGTGGCACGC GGATATTGAG GACTTCATTC ACGCTAAAAC CGGTGAACTA
AAGGACGTTC AACTCCAGAA CTTCAACATC TCTGTGGGTG TTTATGATTA CTTTATGGAG
GCCGTAATGA AAGAGGAGCA GGTTCCCCTG ATAACCCCGA GGAAAACCAA GATACCTGGT
ACAGACCACG AATACTACAT TGTAAAGGCA AGGAATTACA TGCGCGAGGA GTGGGTTCAG
GAGGAGATAC TCAGGGAGTT AGAGGAAAAG GGCTCAGTTT ACCTCGATGA GAGCAAGATA
ATTACGGTGG ATGAGGCTCT GGCTATTGCA GAGAAGGAGG GCGCAGTAAT AAGGTGGGTT
AACGCGAGGA CTCTGTTCGA GCAAATAGTA AAGGGGGCAT GGGACTCAGG TGATCCAGGC
CTTCTGTTCA TAGATGAGAT TAACAGGAGG CATCCCACAT GGTACTTGGG AAAGATCCAG
GCTACCAACC CGTGTGGAGA AGAACCACTA CTCCCCTGGG AGTCGTGCAA CCTAGGCTCC
CTTAACCTAG AGAAGTTCGT CAAGGAAAGG GACGGAACCC CATACATAGA TTGGGACGAC
TTGGCCAATA CCATAAGATA TGCGGTCAGG TTCCTTGATA ACGTGGTAGA TGCTAACAGG
TATCCTCTAC CTCAAATAGA GCAGGCAACC AAGAGGACAA GAAAGGTTGG GCTAGGCGTG
ATGGGCCTAG CGAGAGCGTT GATAAAGCTA GGCATCCCCT ATGACAGCGT GGATGCAGTT
TACGTATCGT ACTATCTCGC TAAGTTCATT TACTACCACG CCATGAAGAC TTCAATTGAG
CTGGCCAAGG AGAAGGGATC CTTCCCCGCA TACGATCCTG TTAGGTACAA GGACGTATGG
GAATCAGCTA GGGAACTCGA CGAGATATTG ACCATTTCTG GGATCAGGGG TAAACCCTCA
GATTACGCAA AGAAGTTGAT GTCAGAGGCC GAGAAATTGG ACGTCACCGT ACTTAAGGAC
ATGAGACTTA AATACGGTTT ACGAAATGCC ACCGTGGTAT CTGTAGCCCC AACGGGCACC
ATATCCATAA TTGCTGGGAC ATCCTCGTCA ATTGAGCCTC TGTTCGCATT GGCGTTCATC
AGGAACGTCG CCGTGGGGAA GTTCATGGAG ATTGACCCTC TCTTCCTGGA GTACCTAAGA
AAGTATGAGT TAGATACGCC AGACGTAGTC AAGAAAATAG CTGAAACTGG AGAGGTTGGA
GATAATCCGT TTGTGCCCAA GACTATAAGA AAGCTGTTCA GAACAGCCCA CGAAGTAGAG
CCAATGTATC ATGTTCTGCA TCAGGCGGCG TGGCAACAGT GGAACGACTC AGGGACATCA
AAGACAATAA ATCTGAGAAG TGAGGAGCCT GCAGATACCG TAGAGAAGGT CTATATGACC
GCTTGGAAGC TGGGAATAAA GGGAATTACA GTATATAGGG ATAAGTCCAA GTCGCAACAG
GTCATATACT TCGGACTGAA GAAGGAGAGG GAGGAGAAGT CAAAGGCTTT GCCATCATCC
CTTAGAATGG AAAAGAAGTT CGTGGAAGTA AGCGAGAACT TCGCTGGTGG ATGCAAGACT
TGTGAACTCT AA
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| Protein sequence | MQSDISILSL SKISVIKRDG RREEFKLEKI LSKLGPLHDE IVDGIAKDVI QNSTDNVINT
RSLADIVERN LIEGSLEHPE LMDLAKKYVL ARIYNHVFGK GKWSEFDPKD LLISYNALKV
LEARYLLKDP ETLRYIETPQ MMFKRVASYL AKVEQDKNVQ QDAAQKFYEI MSSLKFVPNT
PALMNSGTRL GILSACFVLP VRDSMTSPSG DGIYDTLRAM ALVHQQGGGT GFDFSELRPK
GDVVASTAGV ASGPVSFMKI FDVSTDVVKQ GGKRRGANMG VMHAWHADIE DFIHAKTGEL
KDVQLQNFNI SVGVYDYFME AVMKEEQVPL ITPRKTKIPG TDHEYYIVKA RNYMREEWVQ
EEILRELEEK GSVYLDESKI ITVDEALAIA EKEGAVIRWV NARTLFEQIV KGAWDSGDPG
LLFIDEINRR HPTWYLGKIQ ATNPCGEEPL LPWESCNLGS LNLEKFVKER DGTPYIDWDD
LANTIRYAVR FLDNVVDANR YPLPQIEQAT KRTRKVGLGV MGLARALIKL GIPYDSVDAV
YVSYYLAKFI YYHAMKTSIE LAKEKGSFPA YDPVRYKDVW ESARELDEIL TISGIRGKPS
DYAKKLMSEA EKLDVTVLKD MRLKYGLRNA TVVSVAPTGT ISIIAGTSSS IEPLFALAFI
RNVAVGKFME IDPLFLEYLR KYELDTPDVV KKIAETGEVG DNPFVPKTIR KLFRTAHEVE
PMYHVLHQAA WQQWNDSGTS KTINLRSEEP ADTVEKVYMT AWKLGIKGIT VYRDKSKSQQ
VIYFGLKKER EEKSKALPSS LRMEKKFVEV SENFAGGCKT CEL
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