| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1710 |
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| Symbol | |
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| ID | 5105073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1648129 |
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| End bp | 1649817 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507604 |
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| Product | thermosome |
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| Protein accession | YP_001191789 |
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| Protein GI | 146304473 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGAG TTCCAGTTCT TCTATTCAAG GAAGGCACTT CAAGGTCAAC CGGCAGGGAT
GCCCTTAGGA ATAACATACT TGCTGCAAGA ACTTTGGCTG AAATGCTCAG ATCGAGTTTG
GGTCCAAAGG GATTGGACAA GATGCTGATT GACAGCTTCA ACGACGTGAC CATTACCAAC
GACGGAGCTA CAATTGTCAA GGAAATGGAG ATTCAGCATC CAGCTGCCAA GCTTCTAGTT
GAGGCTGCAA AGGCGCAGGA CGCTGAAGTG GGTGACGGGA CAACCAGTGC AGTGGTTCTC
GCAGGCCTTC TCTTGGAGAA GGCAGAGGCC CTTCTAGACC AGAACGTTCA CCCTACCATA
ATTATTGAAG GGTACAAGAA GGCCTTCAAT AAGGCCCTTG AGCTCCTGAC TCAGATTTCC
ACCAAGATAG ATGTTAAGAA CCTTCAGGAT CCTGCAGTTA AGGCCAACCT CAAGAAGATA
GTTTACACCA CAATGGCAAG CAAGTTCATT GCAGAATCTG AGGCCGAAAT GAACAAGATC
ATGGACATAA TCATTGATGC AGTTTCCAAG GTAGCTGAGC CCCTACCCAA CGGTGGTTAC
AATGTGAGCC TTGACCTAGT TAAGATAGAC AAGAAGAAGG GAGGAACAAT AGAGGACAGT
ATCCTAGTCC ACGGTCTAGT TCTTGACAAG GAAGTTGTTC ACCCTGGCAT GCCCAGGAGA
GTAGAGAAGG CCAAGATAGC CGTTCTAGAC GCAGCTCTAG AGGTAGAGAA GCCGGAGATT
TCAGCTAAGA TAAGCATCAC TAGCCCGGAG CAGATTAAGT CCTTCTTAGA CGAGGAGACA
AAGTACCTCA AGGAGATGGT TGACAAGCTG GCCAGCATCG GGGCCAATGT GGTGGTGTGC
CAGAAGGGGA TTGATGATAT AGCTCAGCAC TTCCTTGCCA AGAAGGGAAT CCTGGCTGTT
AGAAGGGTCA AGAGGAGCGA TATTGAGAAG CTAGAGAAGG CGTTGGGAGC TAGGATAATC
AGTAGTATCA AGGATGCAAC TCCCGAGGAC CTAGGCTACG CTGAATTGGT TGAGGAGAGA
AGAATTGGAA ATGACAAGAT GGTCTTCATT GAAGGCGCCA AGAACCCAAG AGCTGTGAAC
ATCCTATTGA GAGGATCCAA TGACATGGCC CTCGATGAGG CCGAGAGAAG TATAAATGAC
GCGCTTCACG CGCTTAGAAA CATCCTATTG GAGCCCATGA TAGTGCCAGG CGGAGGAGCA
ATAGAGGTGG AACTTGCAAT GAAACTGAGG GAATATGCTA GGACAGTTGG AGGAAAGGAG
CAGCTTGCCA TAGAGGCTTA CGCTGATGCC CTAGAGGAGA TCCCAAGCAT ATTGGCTGAA
ACTGCCGGAA TGGAGCCCAT ATCCACCCTA ATGGACCTGA GGGCTAGACA CGTTAAGGGA
ATTGCCAATG CTGGTGTGGA TGTGATAAAC GGAAAGATAG TCGACGACAT GTTCTCCATC
AATGTACTAG AGCCGGTTAG GGTGAAGAGG CAAGTTCTCA AGAGCTCAAC AGAGGCAGCT
ACCTCAGTGC TGAAGATTGA TGATCTAATT GCCGCATCTC AGTTGAAGTC CGAGGGTGGC
AAGGGTAAGA CTCCTGGCGG AGAAGAAGGA GAAGGAGCTG GAATGGGAGG AGCTCCTTCC
TTCGGCTAA
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| Protein sequence | MAGVPVLLFK EGTSRSTGRD ALRNNILAAR TLAEMLRSSL GPKGLDKMLI DSFNDVTITN
DGATIVKEME IQHPAAKLLV EAAKAQDAEV GDGTTSAVVL AGLLLEKAEA LLDQNVHPTI
IIEGYKKAFN KALELLTQIS TKIDVKNLQD PAVKANLKKI VYTTMASKFI AESEAEMNKI
MDIIIDAVSK VAEPLPNGGY NVSLDLVKID KKKGGTIEDS ILVHGLVLDK EVVHPGMPRR
VEKAKIAVLD AALEVEKPEI SAKISITSPE QIKSFLDEET KYLKEMVDKL ASIGANVVVC
QKGIDDIAQH FLAKKGILAV RRVKRSDIEK LEKALGARII SSIKDATPED LGYAELVEER
RIGNDKMVFI EGAKNPRAVN ILLRGSNDMA LDEAERSIND ALHALRNILL EPMIVPGGGA
IEVELAMKLR EYARTVGGKE QLAIEAYADA LEEIPSILAE TAGMEPISTL MDLRARHVKG
IANAGVDVIN GKIVDDMFSI NVLEPVRVKR QVLKSSTEAA TSVLKIDDLI AASQLKSEGG
KGKTPGGEEG EGAGMGGAPS FG
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