Gene Msed_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1705 
Symbol 
ID5105351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1644179 
End bp1645234 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content47% 
IMG OID640507599 
ProductATP-NAD/AcoX kinase 
Protein accessionYP_001191784 
Protein GI146304468 
COG category[S] Function unknown 
COG ID[COG3199] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.481027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTAG GATTTCTGGT TAATCCATAC GCCGGCTCAG GCGGTAGGAT AGGCCTCAAG 
GGAAGCGATG GAATTAGGCT ACTGAATCCC GAAATCCCAG GTAGGGTTTA CAGGTTCCTG
TCCAGAGCCC CTGACGTCGA GTACCTGGTC CCAAGGGGGA AAATGGGAGA GGAATACGTG
AAGCTCAGGA AAAGATACAC TCTTCTCAAC TCCGGCAGAG ACGATTCAAC CAGGCAAGAC
ACGTTGATTG CCGTAGAGGA GATGAAAGAG AAAGGGGTAG ACATAATAAC TTTCGTCGGC
GGAGACGGTA CTGCCAGGGA CGTAGCTGAG GTTGCTGGGA GTTTACCAAT CCTTGGCGTT
CCCGCTGGGG TCAAGATGCA TAGCGGAGTG TTTGCCACAA CTCCCGAGAG TGCTGGAACC
CTCCTAACCC TATTCGTTCA AGGAAAGGCT AGGGTTGTGA AGGCTGAGGT TTTGGACCTG
GACGAAGAGG AATATAGGAA AGGTAGATAT GTGGTTAAAC TGTTTCATGT GGCTAACACT
ATTTCATTTG CAAATTTACT TACTCCAAGT AAGGAAGAAT ACAACTATTC AGACGAAATA
GACTCGATTG CCTATTTTTT TCTAGAAAAA ATAATGAAAG ACGACGTCAC CTACATCATG
GGGCCAGGAG CCACGGTCAA AAGAATAGAA CAGATTCTAG GGCTTTCACC AAACTTTCTG
TCTATTGATA TCATCAAGGG AAAGAAAGTG GTAAAATACA ACGCAAATTA TGAGGATTTG
AAGTCATTAA CCGGGGAGTT AAAGCTGGTC CTAACGCCTA TCGGAGGACA AGGTTTCGTT
ATAGGTAGGG GTAACCAGGA GCTGGGGCCA GAGGTGTTGA GGAGGGTAGG GAGAGAGGAT
CTGATTCTTG TCTCCTCTAG GGCAAAGGTG AACAAGTTAG ACTGTCTCAG ATTTGACACA
GGGGAGCCAT CTCTAGACCT CAAGTTCAGC GGAGTGTACA GGGTAATTGT GGGATACGAT
GAGTATGTGG CCATATCCAC GTGCAGTATC ACTTAG
 
Protein sequence
MRVGFLVNPY AGSGGRIGLK GSDGIRLLNP EIPGRVYRFL SRAPDVEYLV PRGKMGEEYV 
KLRKRYTLLN SGRDDSTRQD TLIAVEEMKE KGVDIITFVG GDGTARDVAE VAGSLPILGV
PAGVKMHSGV FATTPESAGT LLTLFVQGKA RVVKAEVLDL DEEEYRKGRY VVKLFHVANT
ISFANLLTPS KEEYNYSDEI DSIAYFFLEK IMKDDVTYIM GPGATVKRIE QILGLSPNFL
SIDIIKGKKV VKYNANYEDL KSLTGELKLV LTPIGGQGFV IGRGNQELGP EVLRRVGRED
LILVSSRAKV NKLDCLRFDT GEPSLDLKFS GVYRVIVGYD EYVAISTCSI T