Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1701 |
Symbol | |
ID | 5105347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1640786 |
End bp | 1641448 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640507595 |
Product | phosphotransferase domain-containing protein |
Protein accession | YP_001191780 |
Protein GI | 146304464 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.317152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.300647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGTGG ATTTTCACGT TCACTCATTT TTTAGCGATG GAAAGCATGA GCCTGAAACC TTAGTTAAGT ACGCTAAGAA ACTGAACCTG GTTATTGCCC TAACAGATCA CGATACCTCC AGGGGTATTG CCCGCGTTGA GGGAGAGGTT ATACCTGGAC AGGAAGTTAC GACGCAATTT GGACATGTAG TGGTCCTTTG TAACTTCCCT CCAAATCCTC CGAAAGACCT CTCCCTTCTT GTGGACTATT CGCGCGATAA CTCGTGCATA GTTTTCCCTT CGCATCCCTT CGATATTTTC AGGGATGGGA TAGGGGAGCA GGTGTATAAA TTCAAGTTTA ATGCTATTGA GATATATAAT TCGAAGGCCC CGCGAGGAGC AAATGCAAAG GCAGACAGTG TCGCTAGAAC GCTCTCCTTA CCTGGGCTTG CCAACAGTGA CGCTCACGTG AAGGAGTCGT TGGGCTCCGC GTACAATGAG GTAGCTCTAG AGGAGTTTAA CGTGGACGAA ATACTTGAGA AGTTGAGAAA GGGGGAAATA TCACCTGTGC CTGTGGGGCT CACAGTAACC GCTAAATTGA AGATAGCCCA ATGGTATATA GAGAGGAAAC TGGGACTTGA GAAAGATTCC CGCAGAACTA TGCGTGAGGT GCAAGGGAAC TAA
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Protein sequence | MRVDFHVHSF FSDGKHEPET LVKYAKKLNL VIALTDHDTS RGIARVEGEV IPGQEVTTQF GHVVVLCNFP PNPPKDLSLL VDYSRDNSCI VFPSHPFDIF RDGIGEQVYK FKFNAIEIYN SKAPRGANAK ADSVARTLSL PGLANSDAHV KESLGSAYNE VALEEFNVDE ILEKLRKGEI SPVPVGLTVT AKLKIAQWYI ERKLGLEKDS RRTMREVQGN
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