Gene Msed_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1701 
Symbol 
ID5105347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1640786 
End bp1641448 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content47% 
IMG OID640507595 
Productphosphotransferase domain-containing protein 
Protein accessionYP_001191780 
Protein GI146304464 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.317152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.300647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTGG ATTTTCACGT TCACTCATTT TTTAGCGATG GAAAGCATGA GCCTGAAACC 
TTAGTTAAGT ACGCTAAGAA ACTGAACCTG GTTATTGCCC TAACAGATCA CGATACCTCC
AGGGGTATTG CCCGCGTTGA GGGAGAGGTT ATACCTGGAC AGGAAGTTAC GACGCAATTT
GGACATGTAG TGGTCCTTTG TAACTTCCCT CCAAATCCTC CGAAAGACCT CTCCCTTCTT
GTGGACTATT CGCGCGATAA CTCGTGCATA GTTTTCCCTT CGCATCCCTT CGATATTTTC
AGGGATGGGA TAGGGGAGCA GGTGTATAAA TTCAAGTTTA ATGCTATTGA GATATATAAT
TCGAAGGCCC CGCGAGGAGC AAATGCAAAG GCAGACAGTG TCGCTAGAAC GCTCTCCTTA
CCTGGGCTTG CCAACAGTGA CGCTCACGTG AAGGAGTCGT TGGGCTCCGC GTACAATGAG
GTAGCTCTAG AGGAGTTTAA CGTGGACGAA ATACTTGAGA AGTTGAGAAA GGGGGAAATA
TCACCTGTGC CTGTGGGGCT CACAGTAACC GCTAAATTGA AGATAGCCCA ATGGTATATA
GAGAGGAAAC TGGGACTTGA GAAAGATTCC CGCAGAACTA TGCGTGAGGT GCAAGGGAAC
TAA
 
Protein sequence
MRVDFHVHSF FSDGKHEPET LVKYAKKLNL VIALTDHDTS RGIARVEGEV IPGQEVTTQF 
GHVVVLCNFP PNPPKDLSLL VDYSRDNSCI VFPSHPFDIF RDGIGEQVYK FKFNAIEIYN
SKAPRGANAK ADSVARTLSL PGLANSDAHV KESLGSAYNE VALEEFNVDE ILEKLRKGEI
SPVPVGLTVT AKLKIAQWYI ERKLGLEKDS RRTMREVQGN