Gene Msed_1694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1694 
Symbol 
ID5105340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1632267 
End bp1634606 
Gene Length2340 bp 
Protein Length779 aa 
Translation table11 
GC content47% 
IMG OID640507588 
Productphosphoenolpyruvate synthase 
Protein accessionYP_001191773 
Protein GI146304457 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 
TIGRFAM ID[TIGR01418] phosphoenolpyruvate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.434121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTACTC AAATTTTGAA AGAAGAGGGT ATCCTTCCGC TATCGAGAGT AAGGAAAGAA 
ATGGTAGAAT TGGCTGGAGG AAAGGGAGCT AATCTAGGGG AGCTCCTTAG CCAGGGGATC
CGCGTACCCC CTGGCTTCGT TATTACTTCA AAAGCTTACT CGTACTTCTT GGATTATAAT
GGTTTAAGGG ATAAGATTGT TTCAATTTTG AAGGAAGAAG ACTCGTCTGA AAAGGCGAGC
GAGAGGATAA AACACCTGAT TCTCACCTCT CAAGTTCCCC ATGACCTGGA GGAAATGATA
TACGATTCCT TTGACGAACT TTCTAGGGCT GTGGGTAAGG AGATACTTGT AGCTGTCAGG
TCCTCAGCCA CTGCAGAGGA TATAGAGAGC GCAAGCTTCG CTGGCCAGCA GGACACCTAC
CTTAATGTTA GGAGGGCAAA CCTAATCAAT ATGGTCAAGG CAGTTTGGGC TAGTCTCTAT
AACGAGAGGG CCATAGAGTA CAGGAAGAGT AAGGGTATTG ATTCCTCCAA GGTGGAGATG
GCTGTAGTTG TACAGAAAAT GGTGAACTCC AGGTCCTCCG GGGTCATGTT TACGCTTAAC
CCTTCAAACG GTGATAGGAA TTTCATTGTA ATAGAGTCGT CTTGGGGACT AGGAGAGGCA
GTGGTTGGAG GTAAGGTCAC GCCTGATGAG GTTATTATCT CCAAACACGA TCTAAAGATC
CTGGACAAGA GGGTAGCCAA GAAGAACATG AAAATTGTAT ATAACCAGGG CAATAACGTT
GAGGTTCCGC TTAATGGTGA GGAGAGTGAG AGCCCCAGTA TCTCCGATGA GGAGGCCTTG
GAATTAGCTA AACTGGCCCT AAAAATTGAG AGTCATTACG GGATGCCCAT GGATATTGAA
TGGGCAATAG ATGCTGACCT GAAGTTCCCC GACAATGTTT TCATAGTGCA GGCTAGGCCT
GAAACCTTCT GGGCTTCTAA GGAAAAGGAG AAGGTAAAGA CCACAAGCGC AACCCAACCT
ACCGAGAGAA AGATCCTCGT TAAGGGTCTG GCAGCCAGTC CAGGCATAGC TAGTGGAAAG
GCCAGGGTTC TTATGGATGT AAAGGAATCC AAGGATTTCC AGAAGGGAGA GATCCTTGTG
ACGAGAATGA CTGACCCTGA CTGGGTTCCA GTGATGAAGA TTGCTTCCGC AATAGTTACG
GACGAAGGCG GGATCACTAG TCATGCAGCA ATAGTTTCTA GGGAGCTTGG GATACCGGCC
ATTGTAGGGG CCAAGGACGC TACCAAGGTT CTAGAGACTG GTCAAGAGAT CACCGTAGAT
GCTACAAGGG GAGTCGTGTA TGAGGGCAGG ATAATTGCAG AGGAGCCAAA ACAGGAGCAT
CAGGGTACCT CAATTTCCGG ATTGTCTAGG GATGTACTTC TAAGCCTCTT CCCAGTCACT
GGTACTAAGA TATACATGAA TTTGGGCCAA CCTGATGTCA TTGAGAAATA TCTGGACCTT
CCCTTCGATG GAATTGGACT CATGAGGATA GAGTTCATCG TAAGCGAATG GATAAAGCAT
CATCCTCTCT ACCTCATCAA AATAGGTAAA CCTGAGGAGT TTGTGAATAA GCTCGCTGAT
GGAATTGCTA GGGTCGCTTC CGCAATATAT CCTAGACCGG TGGTGGTGAG ATTCTCCGAT
TTCAAGACCA ACGAGTATAG GGGACTGATA GGAGGAGAGG AGTTTGAACC CGAGGAGAGA
AACCCAATGA TAGGATGGAG GGGAGTCTCG CGATATGTGA GTCAGCAGTA CGAACCAGCC
TTTAGACTAG AGGTTAGGGC AATTAGAAAG GCTAGGGAGG AGATGGGTCT TAAGAACGTC
TGGGTTATGT TCCCCTTTGT CAGAACCACG TGGGAGTTGA ACAAGGCAAT AGGGATAATG
GAGGACGAGG GTCTCAGGAG GACTGCCGAC TTCAAGGTCT GGATAATGGC AGAGGTTCCC
TCAGTTATAA CCATGGCCGA TGAGTTCTCC AAGATGATAG ATGGGTTCAG CATAGGTAGT
AACGACTTAG CTCAGCTGAC TCTAGGTGTG GACAGGGACT CAGAAATCCT AGGAAGAATG
GGTTACTATG ACGAAAGGGA TCCAGCAGTA TTGAGATCGA TGAAAAGATT GATCAGAATA
GCCCACAAGT ATGGAAGGAC AGTTTCCATA TGCGGGCAGG CTCCTAGCGT ATACCCAGAG
GTAACCGAGT TCCTGGTGAA GGAGGGAATA GATAGTGTAA GTATAAACCC AGACACCGTT
ATATACACAA GGAGGCTGGT GGCCAGCATA GAGCAGAAGC TCCTTCTAAG AAGGAGGTAA
 
Protein sequence
MVTQILKEEG ILPLSRVRKE MVELAGGKGA NLGELLSQGI RVPPGFVITS KAYSYFLDYN 
GLRDKIVSIL KEEDSSEKAS ERIKHLILTS QVPHDLEEMI YDSFDELSRA VGKEILVAVR
SSATAEDIES ASFAGQQDTY LNVRRANLIN MVKAVWASLY NERAIEYRKS KGIDSSKVEM
AVVVQKMVNS RSSGVMFTLN PSNGDRNFIV IESSWGLGEA VVGGKVTPDE VIISKHDLKI
LDKRVAKKNM KIVYNQGNNV EVPLNGEESE SPSISDEEAL ELAKLALKIE SHYGMPMDIE
WAIDADLKFP DNVFIVQARP ETFWASKEKE KVKTTSATQP TERKILVKGL AASPGIASGK
ARVLMDVKES KDFQKGEILV TRMTDPDWVP VMKIASAIVT DEGGITSHAA IVSRELGIPA
IVGAKDATKV LETGQEITVD ATRGVVYEGR IIAEEPKQEH QGTSISGLSR DVLLSLFPVT
GTKIYMNLGQ PDVIEKYLDL PFDGIGLMRI EFIVSEWIKH HPLYLIKIGK PEEFVNKLAD
GIARVASAIY PRPVVVRFSD FKTNEYRGLI GGEEFEPEER NPMIGWRGVS RYVSQQYEPA
FRLEVRAIRK AREEMGLKNV WVMFPFVRTT WELNKAIGIM EDEGLRRTAD FKVWIMAEVP
SVITMADEFS KMIDGFSIGS NDLAQLTLGV DRDSEILGRM GYYDERDPAV LRSMKRLIRI
AHKYGRTVSI CGQAPSVYPE VTEFLVKEGI DSVSINPDTV IYTRRLVASI EQKLLLRRR