| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1691 |
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| Symbol | |
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| ID | 5105337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1629255 |
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| End bp | 1630529 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507585 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001191770 |
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| Protein GI | 146304454 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.248453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATA GTGAGGAAAT AATACCAAGC TATTGGTATA ACATAATACC CGATTTACCC
AAACCTTTAC CTCCTCCTAG GGATCCCCCA GACGCGGAGT TCTCTAGGAT TGACCTTTTG
AGAAAAATAA TGCCCAGTGA GGTTCTAAGA CAGCAGTTTA CAGTGGAGAG GTTTGTTCCA
ATTCCTAAAG AAGTAAGGGA GGCTTACATC AATATAGGCA GACCTACGCC TTTAGTCAGA
GCTAGAAGGC TTGAGGAATT CCTGAACACT CCGGCTAAAA TATATTTCAA GTATGAAGGG
GCAACTCCCA CTGGTTCCCA TAAGATAAAC ACAGCCCTAC CGCAGGCTTA CTTTTCCATG
AAGGAGGGAG TGGACCACCT GGTCACTGAG ACTGGGGCTG GCCAATGGGG AACAGCTGTA
GCTCTATCTG CGAGAATGTA TGGACTAAAT TCCACCATTT TCATGGTAAA GGTGAGTTAC
GAACAGAAAC CGCAAAGGAG AACCATCATG CAATTGTATG GCGCACGAGT TTTCGCCAGC
CCTACCTCGC ATACCGAGTA CGGCAAGAAG GTTCTAAACG AGAACCCGAA TCATCCAGGT
TCCCTCGGAA TAGCCATGAG CGAGGCAATA GAGTACGCTC TCTCCAACGG CTATAAGTAT
CTCGTCGGGA GCGTGTTAGA TGTTGTGGTG TTACATCAAA GCGTAATAGG GCTTGAGGCT
ATGAAGCAGT TGCAGGAACT AGACGAGGAA CCAGACGTGT TAGTGGGCTG TGTGGGAGGA
GGGAGTAACT TTGGAGGCTT TACCTTCCCG TTCATCGGGT CCAAGAAGGG ATCGAAGTAC
ATTGCAGTTG GATCTTACGA GATACCAAAG TTCAGTAAGG GGGCCTATAA CTACGATTTC
CCAGACAGTG CTGGGCTGTT ACCCCTTGTC AAGATGATTA CCCTAGGAAG GGATTACGTA
CCTCCACCAA TATATTCGGG TGGGCTCAGA TATCACGGGG CCGCGCCCTC CCTAAGTATG
TTGATCAAGG AAGGGATAGT GGATTGGAGG GAGTACAATG AGAAGGAGAT ATTCGAAGCA
GCTCAAATAT TCCTTCAAAC CCAAGGAATA GTTCCAGCAC CAGAATCCTC TCATGCAATT
AGGGCAGTGA TAGAGGAGGC ACGCGAGGCC AAGATCAAGA ACGAGAAAAA GGTGATCGTA
TTCAACCTGA GTGGTCATGG ATTACTGGAT CTACCTAACT ACGAGTCTAT GATGAAGAGG
ATTGGTCAAG ATTGA
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| Protein sequence | MANSEEIIPS YWYNIIPDLP KPLPPPRDPP DAEFSRIDLL RKIMPSEVLR QQFTVERFVP
IPKEVREAYI NIGRPTPLVR ARRLEEFLNT PAKIYFKYEG ATPTGSHKIN TALPQAYFSM
KEGVDHLVTE TGAGQWGTAV ALSARMYGLN STIFMVKVSY EQKPQRRTIM QLYGARVFAS
PTSHTEYGKK VLNENPNHPG SLGIAMSEAI EYALSNGYKY LVGSVLDVVV LHQSVIGLEA
MKQLQELDEE PDVLVGCVGG GSNFGGFTFP FIGSKKGSKY IAVGSYEIPK FSKGAYNYDF
PDSAGLLPLV KMITLGRDYV PPPIYSGGLR YHGAAPSLSM LIKEGIVDWR EYNEKEIFEA
AQIFLQTQGI VPAPESSHAI RAVIEEAREA KIKNEKKVIV FNLSGHGLLD LPNYESMMKR
IGQD
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