| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1689 |
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| Symbol | trpD |
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| ID | 5105335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1627506 |
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| End bp | 1628537 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507583 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001191768 |
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| Protein GI | 146304452 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.304746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0692576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCCTA AGGAGGTCCT CAAGAGATTA ACCGAAGGCG TATCCTTGTC TCAAGAGGAG
GCAAAGGAAT TAGCCGATTT AATCATGGAG GGATCAATAC CAGAACCTTT GGTTGCTGGT
ATCTTAGTTG CACTAAAGAT GAAAGGAGAG ACCCCAGACG AAATAATAGG ATTTGTCAAT
TCCATGAGGC AACATGCGCT AAAACTGGAC TTGAGGAACA CCCTCGACAC GGCTGGCACG
GGAGGAGACG GTATAGGAAC AATTAACGTT AGCACGGCTA CTGCTCTGGC CGTTAGCTCT
GTCTTTCCTG TGGCGAAACA TGGTAATAGG GCTGCAAGTA GTAGAAGCGG AAGCGCGGAC
TTCCTTGAAT CCCTTGGGTA CAATATCCAA GTTCCTCCAG AGAAGGCCAA GGATCTACTT
TCGCGGAACA ATTTCGTGTT TCTCTTTGCA CAGCTATATC ATCCTTCCAT GAAGAACGTT
GCACCTGTAA GGAAGGTCCT AGGAGTTAGA ACTATCTTCA ATCTCCTGGG CCCTCTCACC
AACCCAGCAG GATCCGAGAG GCAGGTCATG GGAGTATACT CTCTGCCTTT CATGAGAAAG
CTAGCTGAAG CAGCACTTAA GCTAGGTTAC GTCAAGCTTG TACTTGTTCA CGGGGAGCCT
GGACTGGATG AGGTCAGCCC TCAAGGGAAG ACATATATCA CAGAGGTAAC GGGGAGTAAG
GTTGAGGAAT ATACCTATGA TTTCTCTGAA ATTATAGGTC AACCAGTTCC TGTTTCCAGA
TTGACGACCA CAGATCCTCT CGACTCCGTG AGAAGAGTTC TGATGGCGTC CATGGGGAGG
GATGAGGCCG TAGAGAAGTT CATTAGAATA AACGTGAGCG TCGCACTTTA CACTGCGGGA
CTTGTTTCTG ATTTTAAGGA TGGATTTGAA TTATCAGAGG AACTTGTAAG AAAGTTGCCA
GATCGAATTG AGACTTTGGT AAGGGACAAT GGAGATCCTA GTAAGATCAA GGCCATAAAG
GGATCCCTAT GA
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| Protein sequence | MDPKEVLKRL TEGVSLSQEE AKELADLIME GSIPEPLVAG ILVALKMKGE TPDEIIGFVN
SMRQHALKLD LRNTLDTAGT GGDGIGTINV STATALAVSS VFPVAKHGNR AASSRSGSAD
FLESLGYNIQ VPPEKAKDLL SRNNFVFLFA QLYHPSMKNV APVRKVLGVR TIFNLLGPLT
NPAGSERQVM GVYSLPFMRK LAEAALKLGY VKLVLVHGEP GLDEVSPQGK TYITEVTGSK
VEEYTYDFSE IIGQPVPVSR LTTTDPLDSV RRVLMASMGR DEAVEKFIRI NVSVALYTAG
LVSDFKDGFE LSEELVRKLP DRIETLVRDN GDPSKIKAIK GSL
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