| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1684 |
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| Symbol | |
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| ID | 5105330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1623126 |
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| End bp | 1624316 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507578 |
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| Product | aspartate aminotransferase |
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| Protein accession | YP_001191763 |
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| Protein GI | 146304447 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.121725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0684909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATT TCGCTGGTTC GCTTTCAAGA TTAACTGGAG AGTCAACCCT CCTTTATCAG
GAAATAGCCA GAAACGTGGA GAGGACCAAG GGAATAAAGA CCATCAACTT CGGCATAGGC
CAACCTGATC TACCAACTCC TCAGAGAATA AGGGAAGAGG CTAAACTGGC ACTGGATAAG
GGTTTCACCG CATACACCCC AGCACTGGGG TTAGACGAGT TAAGATCCAA GATAGCGGAA
TTTCTTACCC AGAGATACGG GGATCAAATA AGGAAGGAAG AGGTAGCTGT TACGCCTGGG
GCTAAGACTG CACTCTTCCT GGCATTTCTC ATGTATGTTA ACCCTGGCGA TGAGGTAATC
CTATTCGATC CTTCCTTCTA CTCCTATGCA GAAGTGGTTA ACCTCCTAGG GGGAAAACCA
GTTTATGTCC CTCTCAGCTT TGACGAGAAC TCGGGTTTCA GTGTCGACAT GGATGAGTTA
GTTTCCAAGA TCACTCCCAG AACCAAGATG ATAGTTTATA ATAACCCTCA TAACCCGACT
GGAATGAACT TCAACGATAA ACTTGCGAGG GAACTAGTTG AGATAGCTAG GGAGAAGAGG
TTAATCCTTC TTTCAGACGA AATTTACGAC TACTTCGTCT ATGACGGCGG TTTCAGGAGC
GTGCTTCAGG AAGCGTGGAG AGATAACGTG ATTTACATAA ACGGGTTCAG CAAGACCTTC
AGCATGACAG GTTGGAGACT GGGATATATT GTTGCCAAAA GGGAGGTCAT TAACAAGGTT
GGCATATTAG CGTCCAATAT ATACACATGT CCCACTAGCT TTGCCCAAAG GGGTGCATTA
GCCTCCTTTG ATACCTTCGA CGAGGTGAGA CGCATGATAG ACCTGTTTAA GAGAAGGAGA
GACGTTATGT TCTCGGAGCT TAAGTCCCTC AAGGGAATTA GGGTTTACAA GTCGTCTGGG
GCATTCTACA TGTTTCCAGA CGTTAGCGAA ATCCTGAAGA CGACTGGAAT GGATTCAAAG
GCCTTAGCGG TGAAAATAAT TGAGGAGGGG GGTGTGGTAA CTATCCCAGG TGAGGTGTTT
CCAGAAAAGG TTGGGAGAAA CTTCCTGAGA TTGAGCTTTG CCCTAGATGA GGAGAAAATT
AAAGAGGGCG TGTCAAGGAT GAAAATGGCA CTGGAGAAAC TCACAGGTTG A
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| Protein sequence | MENFAGSLSR LTGESTLLYQ EIARNVERTK GIKTINFGIG QPDLPTPQRI REEAKLALDK
GFTAYTPALG LDELRSKIAE FLTQRYGDQI RKEEVAVTPG AKTALFLAFL MYVNPGDEVI
LFDPSFYSYA EVVNLLGGKP VYVPLSFDEN SGFSVDMDEL VSKITPRTKM IVYNNPHNPT
GMNFNDKLAR ELVEIAREKR LILLSDEIYD YFVYDGGFRS VLQEAWRDNV IYINGFSKTF
SMTGWRLGYI VAKREVINKV GILASNIYTC PTSFAQRGAL ASFDTFDEVR RMIDLFKRRR
DVMFSELKSL KGIRVYKSSG AFYMFPDVSE ILKTTGMDSK ALAVKIIEEG GVVTIPGEVF
PEKVGRNFLR LSFALDEEKI KEGVSRMKMA LEKLTG
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