| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1675 |
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| Symbol | |
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| ID | 5105321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1615951 |
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| End bp | 1616922 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507569 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001191754 |
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| Protein GI | 146304438 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00128597 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.196753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGACA ACTTTATGGA TGTTTCTCTA AATAAAGAAA ATCTAGCCAT ATTAATAACA
GATCCTATAG ACGAGTATAT GATCAGGACG CTGAAGACTA AAGGGCTAAA GATTAACTAT
CAACCTGACA TAGAGAGGGA GGAGCTACTT AAGGTAGTCG AGAACTACGA CGTACTTGTG
GTAAGGAGCA GAACTAAGGT TGACAAGGAG GTCATAGAGA GGGGAAAGAG GCTAAAGGTT
ATAGCGAGGG CAGGAATCGG AGTGGATAAC ATAGACACGG AGGAGGCGGA AAAGAGAAAA
ATTAGGGTAG TATACGCTCC AGGGGCTTCC ACCGATTCTG CAGCAGAGTT AACCATAGGT
CTCATGCTAG CTGGAGCTCG CAACATGTTT ACGTCTATGA CCTTAGCGAA ATCTGGAATC
TACAAGAAGA CTGAAGGCGT GGAGTTGAGC GGAAAAACAA TTGGAATAAT TGGATTCGGA
AGAATAGGGT ATAAGGTTGG GCTGATCGCA AGGGCAATGG GAATGAATGT TTTGGCATAC
GACGTAGTTG ATGTTTCCAA GAGAGCTATG GAGATAGGGG CAAGAGCAGT TTCCCTTGAC
GAATTGGTTA CCCAATCCGA CGTGATTAGT ATTCATGTGA CTGTGGGGAA GGACGCTAAA
CCAATACTAA CCTCCAGAGA GTTCGAAATG ATGAAAAAGG GTGTTATAAT AGTTAACACG
AGCAGGGCAG TCGCTGTTGA CGGAAAGGCC CTCCTCCACT ACATAAAGGA GGGGAAGATA
ATGTCCTACG CTACAGATGT ATTCTGGCAC GAACCCCCGA AGGAAGAGTG GGAGTTGGAG
TTACTTAAGC ATGAGAGGGT CACCGTAACC ACCCACATAG GAGCCCAGAC CAAGGAGGCC
CAATACAGGG TAGCTGTTAT GACCACGGAA AACCTACTGA AGACCCTTCA GGAGCTCGGT
GTTAAACTTT GA
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| Protein sequence | MADNFMDVSL NKENLAILIT DPIDEYMIRT LKTKGLKINY QPDIEREELL KVVENYDVLV
VRSRTKVDKE VIERGKRLKV IARAGIGVDN IDTEEAEKRK IRVVYAPGAS TDSAAELTIG
LMLAGARNMF TSMTLAKSGI YKKTEGVELS GKTIGIIGFG RIGYKVGLIA RAMGMNVLAY
DVVDVSKRAM EIGARAVSLD ELVTQSDVIS IHVTVGKDAK PILTSREFEM MKKGVIIVNT
SRAVAVDGKA LLHYIKEGKI MSYATDVFWH EPPKEEWELE LLKHERVTVT THIGAQTKEA
QYRVAVMTTE NLLKTLQELG VKL
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