Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1666 |
Symbol | |
ID | 5104871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1608972 |
End bp | 1609394 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640507560 |
Product | peptidase S26B, signal peptidase |
Protein accession | YP_001191745 |
Protein GI | 146304429 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02228] signal peptidase I, archaeal type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0106868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAGA GTGATATAGC GATCATCATT CTTATCGCCC TAGTTTATAT CGTGTTCTAC TCTAATATTG TAAGCTCCGC GAGCGTAGAG GGAGTATCAA TGTATCCCAT TTTTCAGAAT GGCGCACTCA CTTTCTATCA GTCTCCCACA CACATTACGT ATCACTCAAT CATAATATAC AGGTCACCTC AACTACACAC CTATGTGATC CATAGGGTCA TTAGAGTAGA CGGAACGTAT TACGTAACCC AGGGGGTAGA TAAGATATCA AACCCGCAAC CTGATAATCA AATAGGGTTA GAACCGGCCC CTGGCGTTCC CTCGAGTGAT GTAATAGGAA AAGTTACTGA GATAGATGGG TATGTGATTT CCATTCCTTA CTTGGGTTAC CTATCCATTC TACTTTCTTC CTTGGCTCGC TAA
|
Protein sequence | MKKSDIAIII LIALVYIVFY SNIVSSASVE GVSMYPIFQN GALTFYQSPT HITYHSIIIY RSPQLHTYVI HRVIRVDGTY YVTQGVDKIS NPQPDNQIGL EPAPGVPSSD VIGKVTEIDG YVISIPYLGY LSILLSSLAR
|
| |