Gene Msed_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1666 
Symbol 
ID5104871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1608972 
End bp1609394 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content42% 
IMG OID640507560 
Productpeptidase S26B, signal peptidase 
Protein accessionYP_001191745 
Protein GI146304429 
COG category 
COG ID 
TIGRFAM ID[TIGR02228] signal peptidase I, archaeal type 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0106868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA GTGATATAGC GATCATCATT CTTATCGCCC TAGTTTATAT CGTGTTCTAC 
TCTAATATTG TAAGCTCCGC GAGCGTAGAG GGAGTATCAA TGTATCCCAT TTTTCAGAAT
GGCGCACTCA CTTTCTATCA GTCTCCCACA CACATTACGT ATCACTCAAT CATAATATAC
AGGTCACCTC AACTACACAC CTATGTGATC CATAGGGTCA TTAGAGTAGA CGGAACGTAT
TACGTAACCC AGGGGGTAGA TAAGATATCA AACCCGCAAC CTGATAATCA AATAGGGTTA
GAACCGGCCC CTGGCGTTCC CTCGAGTGAT GTAATAGGAA AAGTTACTGA GATAGATGGG
TATGTGATTT CCATTCCTTA CTTGGGTTAC CTATCCATTC TACTTTCTTC CTTGGCTCGC
TAA
 
Protein sequence
MKKSDIAIII LIALVYIVFY SNIVSSASVE GVSMYPIFQN GALTFYQSPT HITYHSIIIY 
RSPQLHTYVI HRVIRVDGTY YVTQGVDKIS NPQPDNQIGL EPAPGVPSSD VIGKVTEIDG
YVISIPYLGY LSILLSSLAR