Gene Msed_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1661 
Symbol 
ID5104866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1603901 
End bp1604662 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content46% 
IMG OID640507555 
Producthypothetical protein 
Protein accessionYP_001191740 
Protein GI146304424 
COG category[R] General function prediction only 
COG ID[COG1938] Archaeal enzymes of ATP-grasp superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.32781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAATG TGGAGGAAGG ATTTGAGATA GAGGAAAATT ATGTCCCTGA TATAAGGAAA 
CCCGCGTACA TGATCGTAGG TATACCTGAT GCTGGTCTAG TTGGGGAGAT AGCCACAGAG
TATATGATCG GTAAGGGTCT AGTTCAAGAA TACGGCCAGG TGTTTTCCAG AAAGTATCTT
CCACCAATAC TTCACGTTGA TGATGGTGTT GCTAAGTCTC CCCTAAGGCT CTATTACGGA
AAGGATATCA ACGTCATAGT CCTTCACTCG TGGACCGCCC TCCCGGTGAA TTCAGCCTAT
CCCCTAGCTA GGTTCATAAC AGATTATGCA ATAAGGTATG GCATCAGCTC AATAATTTCC
ATTACGGGAC TTCCCATACC CAACAGACTC GATATAGATA AACCATCAGC TTACTGGATA
GCTAACTCGA AGGATTTAGC TTCTAGTTTG AGCGGGCTCG ACAATGTTCA GAAATTTGGT
CAGGGTTATA TCTCCGGTCC ATATGCTCCC ATTCTCTATG AGACTGCCAA GAAAAACATT
GGCAACTTCG CCATTGTGGT GGAGTCTTTT CTGGACATAC CGGATCCGGA GGCCTCAGCT
GTAGCCCTAG AAATAGTCGG AAAATACCTG GGTTTCACCA TTGATACGAG CGCTCTCTTG
CAGGAGGCAG AAGAGATAAG GTCCAGGATC AAGGGTCTAA TGGAGCAAAC CAAGAGGGAG
CTTCCCACTT ACTCCTCAGG AAAACCAATG ACCTACGCGT GA
 
Protein sequence
MINVEEGFEI EENYVPDIRK PAYMIVGIPD AGLVGEIATE YMIGKGLVQE YGQVFSRKYL 
PPILHVDDGV AKSPLRLYYG KDINVIVLHS WTALPVNSAY PLARFITDYA IRYGISSIIS
ITGLPIPNRL DIDKPSAYWI ANSKDLASSL SGLDNVQKFG QGYISGPYAP ILYETAKKNI
GNFAIVVESF LDIPDPEASA VALEIVGKYL GFTIDTSALL QEAEEIRSRI KGLMEQTKRE
LPTYSSGKPM TYA