Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1661 |
Symbol | |
ID | 5104866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1603901 |
End bp | 1604662 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640507555 |
Product | hypothetical protein |
Protein accession | YP_001191740 |
Protein GI | 146304424 |
COG category | [R] General function prediction only |
COG ID | [COG1938] Archaeal enzymes of ATP-grasp superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.32781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATTAATG TGGAGGAAGG ATTTGAGATA GAGGAAAATT ATGTCCCTGA TATAAGGAAA CCCGCGTACA TGATCGTAGG TATACCTGAT GCTGGTCTAG TTGGGGAGAT AGCCACAGAG TATATGATCG GTAAGGGTCT AGTTCAAGAA TACGGCCAGG TGTTTTCCAG AAAGTATCTT CCACCAATAC TTCACGTTGA TGATGGTGTT GCTAAGTCTC CCCTAAGGCT CTATTACGGA AAGGATATCA ACGTCATAGT CCTTCACTCG TGGACCGCCC TCCCGGTGAA TTCAGCCTAT CCCCTAGCTA GGTTCATAAC AGATTATGCA ATAAGGTATG GCATCAGCTC AATAATTTCC ATTACGGGAC TTCCCATACC CAACAGACTC GATATAGATA AACCATCAGC TTACTGGATA GCTAACTCGA AGGATTTAGC TTCTAGTTTG AGCGGGCTCG ACAATGTTCA GAAATTTGGT CAGGGTTATA TCTCCGGTCC ATATGCTCCC ATTCTCTATG AGACTGCCAA GAAAAACATT GGCAACTTCG CCATTGTGGT GGAGTCTTTT CTGGACATAC CGGATCCGGA GGCCTCAGCT GTAGCCCTAG AAATAGTCGG AAAATACCTG GGTTTCACCA TTGATACGAG CGCTCTCTTG CAGGAGGCAG AAGAGATAAG GTCCAGGATC AAGGGTCTAA TGGAGCAAAC CAAGAGGGAG CTTCCCACTT ACTCCTCAGG AAAACCAATG ACCTACGCGT GA
|
Protein sequence | MINVEEGFEI EENYVPDIRK PAYMIVGIPD AGLVGEIATE YMIGKGLVQE YGQVFSRKYL PPILHVDDGV AKSPLRLYYG KDINVIVLHS WTALPVNSAY PLARFITDYA IRYGISSIIS ITGLPIPNRL DIDKPSAYWI ANSKDLASSL SGLDNVQKFG QGYISGPYAP ILYETAKKNI GNFAIVVESF LDIPDPEASA VALEIVGKYL GFTIDTSALL QEAEEIRSRI KGLMEQTKRE LPTYSSGKPM TYA
|
| |