| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1638 |
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| Symbol | alaS |
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| ID | 5104843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1577875 |
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| End bp | 1580589 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507528 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001191717 |
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| Protein GI | 146304401 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGAA ATCAGGAGGA GTACAGGCTC AAGTTCTTTC TTGATCACGA TTACCTAAGA
AGGGAATGTA AGGTATGTAA AACTCCTTTC TGGAGCAAGG ACAAGACCAG GGAGGACTGT
GCAGATATCC CATGTTCAGA CTACTACTTC CTGGACATGA AGGAGAGCAA CCTCAATTGG
AGCGTGAGTG AGGCTAGGAG GAGGTTCCTG GACTTCTTCA GGAGGAATGG GCACGAGATA
ATCCCACCGA AACCGGTGCT AGCAAGATGG AGAGAGGACC TCTACCTCAC GATTGCGAGT
ATCGTTGATT TTCAGCCATA TATCACGAGC GGGATCTCTC CACCACCTGC CAATCCCCTG
GTCGTTTCAC AACCCTGCAT TAGAATGGAT GACGTTGATA ACGTTGGGAT AACCTTCGGG
AGACATCTCA CGACCTTCGA GATGGGTGGT CATCATGCGT TCAACTACCC CGATAAGTTC
CTGTATTGGA AGGATGAGAC TGTTGCCTAC GCCAAGGAGT TCTTCACGAA GGAGATGGGA
ATACCTGAGG AACTGCTCAA CTTCAAGGAG TCCTGGTGGG AGGGAGGAGG AAATGCAGGA
CCGTCATTTG AAGTAACTGT GGGGGGGCTT GAGCTAGCAA CCCTTGTGTT CATGCAATAC
GAGATAAGGG ATGGAGAGTA CGTACCCCTG AAGCTCAAGA TCGTGGATAC AGGATACGGG
ATAGAGAGGC TCGCTTGGTT CACCCAGAAA ACGCCAACTG CCTTCCACGC AATATATGGG
GAGTTAGTGG ACAAGTTTCT TGAAAAACTC GGTCTACCCA GCTTGAATCC AGATATGCTG
AAAGTTGCGT CAAGGTTTGC AGGAAGGATT GACCCTGACG TTCCTTCCAC GATCCAGGGA
CATAGGGAAC AGGTCGCAAA GGCAATGGGT CTTCCCGTTA AGGAGGTTAG TGAGGAATTA
ACCAGGGCTG CCAGGGTGTT CCAAGTACTT GACCACACAA AGACGATTGC GCTCATGCTT
GGGGATGGCC TTGTCCCCTC AAGCGGAGGT GAAGGATACC TTGGAAGGCT GTTGATAAGG
AGAGCCCTCA GGACCCTGAA GCTCTTGAAC GTGGATGTGA GACTCTCGGA GCTAGTGGAT
ATGCAGATAG GCTTCTGGGG AAAGGACTTC ACTCAACTCG TGAGGAACAG GGACTACATA
CTGGACGCAG TCAACCTTGA ACAGGAGAAG TTCAACGAGA TACTCAACAG GATGAGCTCT
GTGGTTAGCT CGCTTACCAA GAAGAAGGAG ATTGGTGTTG AGGACCTGAT CCAGCTGTAC
GACTCCCAGG GAATTCCCCC AGACCTGATG GCTGAGGAGA TGAGGTCTAA GGGTCTTAAG
GTTGAAGTTC CGCATAACTT CTACTCAATA GTCGCGAAGA GGCACCAGAG TGCTCCTGTC
AAGAAGGAAT GGGATACCAC GAAGTTACCG CCAGAGGTTG TGAAACAGGT AAAGGACTTA
CCTCCAACGG AGAAGTTATA CTACAAGGAT CAATATGCCA GGAACTTTGA GGGCGTCATC
GTTAAGTCTC TGGGTAAATA CCTCGTGCTG GATAGGACCG TGTTCTACCC GGAGGGCGGT
GGACAGTTGG GAGATCAGGG ATGGCTTCTA CTGGATGGAC AAAGGGTAAA AGTTGTGGAT
ACACAAAAGG TTGGTGATGT GGTAGTTCAC GTTCTAGAGA GGGAGATCTC AGCGAAGGAA
GGGGACAAGG TAAAGGGCGA GATCGACTGG GTCAGGAGGT TCAGGATGAT GAGACACCAC
ACCGGAACTC ACGTTGTTCT AGCAGCCGCG AAGAAGCTCC TCGGTGATCA CGTATGGCAG
GCTGGCGCAG AGAAAACCCC AGAGAAGGCC AGGCTTGACA TAACCCATCA CAGGAACCTC
ACAAGGGAGG AGGTGAAAAG GATAGAGGAA ATGGCCAACC TCGTCGTGGA TGATAGGAGG
CCCGTGACTC CATTTGAGAT AAACAGGACT GAGGCCGAAA CTAAGTACGG GGTCTCAATT
TACGAGGGAG GAGTGCCCAA CAAGGCAGTG ATCAGGCTCC TTGAGATAAA GGACTGGGAC
GTGGAGAGCT GTGGAGGAAC ACACGTTGCA AACACTGCTG ACATTGGCGG AATCAAGATA
GTCAACGTTG AGAAAATACA GGATGGGATA ATTAGGCTGG AGTACGTGGC TGGGGACGTC
ATCTCGTCTT ATGCGGGGAA CCTAGAGGAC AAGCTTGAGG GGTTAGCGAG CAAACTTGAG
ACGTCAACCT CGCAGATTGA GAGCAGAGTT GAGAAATTGA AGGAAGAGAA CGAGAGGATG
AAGGAGTTAA TAGCCTTCTA CAGGAGGCAA TACCTAGATG ACCTTGAGAA ACATGTGGAA
ACCAGGAACG TTGGGAAGGT CAAGATCGTG ATACTACCAA GTCTGAAGGA TGAGGATCTG
GAGAGGGAGG CTATGAGGAG ATTGACTTCA ACTCAGGGAG TTGTTGTGAT TCACGTTAAC
CAGGTTAATG GGAAGCTACA GATAGAGATT GGAACTAGCA AGGACCTCAA CGTGTCCACC
GTCGTAACGG AGCTCGTAAA GGCGGGAGGA AAGGGAGGAG GAAGAGGGAC CTTTGGATCA
GTAATGATAG AGAAGGGAAC AAAGGAGGAG GTAATTGATA TCGTGGAGAG AGCAATTAAG
GGAGGCAATT CTTGA
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| Protein sequence | MKGNQEEYRL KFFLDHDYLR RECKVCKTPF WSKDKTREDC ADIPCSDYYF LDMKESNLNW
SVSEARRRFL DFFRRNGHEI IPPKPVLARW REDLYLTIAS IVDFQPYITS GISPPPANPL
VVSQPCIRMD DVDNVGITFG RHLTTFEMGG HHAFNYPDKF LYWKDETVAY AKEFFTKEMG
IPEELLNFKE SWWEGGGNAG PSFEVTVGGL ELATLVFMQY EIRDGEYVPL KLKIVDTGYG
IERLAWFTQK TPTAFHAIYG ELVDKFLEKL GLPSLNPDML KVASRFAGRI DPDVPSTIQG
HREQVAKAMG LPVKEVSEEL TRAARVFQVL DHTKTIALML GDGLVPSSGG EGYLGRLLIR
RALRTLKLLN VDVRLSELVD MQIGFWGKDF TQLVRNRDYI LDAVNLEQEK FNEILNRMSS
VVSSLTKKKE IGVEDLIQLY DSQGIPPDLM AEEMRSKGLK VEVPHNFYSI VAKRHQSAPV
KKEWDTTKLP PEVVKQVKDL PPTEKLYYKD QYARNFEGVI VKSLGKYLVL DRTVFYPEGG
GQLGDQGWLL LDGQRVKVVD TQKVGDVVVH VLEREISAKE GDKVKGEIDW VRRFRMMRHH
TGTHVVLAAA KKLLGDHVWQ AGAEKTPEKA RLDITHHRNL TREEVKRIEE MANLVVDDRR
PVTPFEINRT EAETKYGVSI YEGGVPNKAV IRLLEIKDWD VESCGGTHVA NTADIGGIKI
VNVEKIQDGI IRLEYVAGDV ISSYAGNLED KLEGLASKLE TSTSQIESRV EKLKEENERM
KELIAFYRRQ YLDDLEKHVE TRNVGKVKIV ILPSLKDEDL EREAMRRLTS TQGVVVIHVN
QVNGKLQIEI GTSKDLNVST VVTELVKAGG KGGGRGTFGS VMIEKGTKEE VIDIVERAIK
GGNS
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