| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1631 |
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| Symbol | |
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| ID | 5104836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1573435 |
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| End bp | 1574556 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507521 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_001191710 |
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| Protein GI | 146304394 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00422743 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTGTT TCGACAGGTT AAAGAAAGCC TTTTCGTCCT TTACAGAGAA ACTTTCCAAT
AAGTTCGAGA AAGAGGAACC TAGGGAGGAA CAAAAACAGG AGGAAAATGT TCCTCAAATC
TCTCCTTCTC AAGCTCAACC CTCACAAGAG ACTGTGTCTC AGCCACCACA GGAACCAACG
CCTCAACCAG CTCAACCGGT ACAGTCTAGG AAAGAGGTTG AGGAAAAACC CAAGGAGAAG
GAGTCCAAGT CTGGCTTCTT TAGTTTCTTC AAGTACAGGG AAATTAAGGA GGAGGACATC
TCTGACCTCA TTGAGGAGCT CAGGATAGAA CTCCTTGAAG ATGACGTCTC CCTCGAGGTA
ACGGATAAGA TCTTAGAGGA CCTGAAGAAC ACCCTTGTGG GTCAGAAGGT CTCAAGAAGG
GAAAACATTG AGGAGCTTAT ACAGGAGTCA CTAAAAAAAT CACTAAGGGA GATTCTAAGA
AAAAATTACA GAGAAAGAGA CATGATTGAA ACCATTAAGA GTTCCAAGAA ACCCTACGTT
ATAGTGTTCT TTGGAGTTAA CGGCGTGGGG AAGACGACCA CAATTGCAAA GTTCGCCATG
TTACTTAGGA AGAATGGGTT ATCCGTGATC ATAGCTGCTT CAGACACCTT CAGGGCAGCG
GCTCAGGAAC AGCTCGCCTA TCATGCAACT AAACTCGAGG TTCCACTGGT CAAGGGAAAA
TATGGGGGAG ATCCAGCCTC AGTGGCCTTT GACGCAATCC AGTCCGCCAA GAGTAGAGGT
ATAGACGTAG TCCTAGTGGA CACGGCCGGA AGGATGCATA CCGACAAGGA CTTAACGGAG
GAACTCAAGA GAGTGGTAAG GGTAGCCAAG CCAGACCTCA AGATCCTTGT TCTAGATTCG
CTGGCAGGAA ATGATGCACT ACAACAGGCT GAGTATTTCG AGAAGAACGT GGGGTATGAC
GCCGTTATCC TCACGAAGGT TGATGCAGAC GCCAAGGGAG GAGTAGCCCT TTCTCTGGCA
TATAAGCTGG GGAAACCCGT GATCTATCTG GGAATGGGTC AGGATTACGA ATCCCTTATT
AAGTTTGACC CAGATTGGTT CGCGGACAGA TTATTAAGTT AA
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| Protein sequence | MNCFDRLKKA FSSFTEKLSN KFEKEEPREE QKQEENVPQI SPSQAQPSQE TVSQPPQEPT
PQPAQPVQSR KEVEEKPKEK ESKSGFFSFF KYREIKEEDI SDLIEELRIE LLEDDVSLEV
TDKILEDLKN TLVGQKVSRR ENIEELIQES LKKSLREILR KNYRERDMIE TIKSSKKPYV
IVFFGVNGVG KTTTIAKFAM LLRKNGLSVI IAASDTFRAA AQEQLAYHAT KLEVPLVKGK
YGGDPASVAF DAIQSAKSRG IDVVLVDTAG RMHTDKDLTE ELKRVVRVAK PDLKILVLDS
LAGNDALQQA EYFEKNVGYD AVILTKVDAD AKGGVALSLA YKLGKPVIYL GMGQDYESLI
KFDPDWFADR LLS
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