Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1627 |
Symbol | |
ID | 5104832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1571802 |
End bp | 1572065 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640507517 |
Product | 50S ribosomal protein L31e |
Protein accession | YP_001191706 |
Protein GI | 146304390 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2097] Ribosomal protein L31E |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000110711 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGCAGA AGGATAATTT TGAGATGGTT ATAAACTTAA GGAAAGCACA CGACTCCAAA AGGCCAAAGA AGTTCAAGAG CGCGGTCAAT CTGATAAGGG GGACTGTATC GAGGCACTTT GGTGCAGAAA AAGTGATTCT AGATCCATTT CTACTTAGCT ATATCTCTTC AAACTCTAAG GATAAAATAA CGAGAAGAGT GAGAGTGGTA GTCACTAAGA TAGGAGAAAA GACTTTTCTT GTGAAGCTAG CAGTGAAGCC TTAA
|
Protein sequence | MEQKDNFEMV INLRKAHDSK RPKKFKSAVN LIRGTVSRHF GAEKVILDPF LLSYISSNSK DKITRRVRVV VTKIGEKTFL VKLAVKP
|
| |