| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1626 |
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| Symbol | rpl39e |
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| ID | 5104831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1571643 |
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| End bp | 1571798 |
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| Gene Length | 156 bp |
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| Protein Length | 51 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640507516 |
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| Product | 50S ribosomal protein L39e |
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| Protein accession | YP_001191705 |
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| Protein GI | 146304389 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2167] Ribosomal protein L39E |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000120847 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAGAT ACAAACCATC TGGTCTAAAG AAGAGGTTAA ACAAGGCACT AAAGTCAAAC
TCCTCCGTAC CAGCCTGGGT CATTCTCAAG ACCAACGGCG AAGTTAGATT TAATCCAAAG
AGAAGGAACT GGAGAAGAAA CGACCTTAAG GTGTAA
|
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| Protein sequence | MSRYKPSGLK KRLNKALKSN SSVPAWVILK TNGEVRFNPK RRNWRRNDLK V
|
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| |