| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1619 |
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| Symbol | |
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| ID | 5103983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1564862 |
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| End bp | 1565722 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507509 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001191698 |
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| Protein GI | 146304382 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTC AGCTTGGCGA GCCACCCACT GATGCAGATC CCTTCATTTA TTTCATGGAG
TCACTAAAGT TTTCTGGTGC TGGTCAAGGA ACAATAAAGC TATACTCTAC CGCCATCCAG
GACTTTTTAC AGTTCGTCAA GAAGGATCCT AGGAGTGTTA CCACCCAGGA CGTGATAGAC
TGGATCGGTT CCCTTAACTC CAGAAAGGGA AGATCGAGGG TAGTGGATAA AAGGGGCAGG
TCGGCAACAA TCAGAAGCTA CGTAATCGCG GTGAGAAGAT TTCTGAAGTG GCTGGGGGTA
AATGTGAAAC CTCCTGTGCC CAGAATAAGG AGCCCTGAAA GGATGGCCTT GAGAGAGGAA
GATATTGTAG CTCTTCTCTC GGCCTGCAGG AGGTTGAGGG ACAAGGTCAT AGTTTCACTC
TTGGTGGACA CTGGTCTTCG TTCCTCTGAG CTACTCTCGT TGAGGAGAAG CGACGTAGAT
CTGGAAAGAA TGCTCATTAG GGTTCGAGAG ACCAAGAACG GAGAGGAAAG GATAGTCTTC
TTCACCTCTA GAACGGCAAC CCTACTTAGG CAATACTTAA GGAAGACCCA AGATAAGGAA
AGCGATGACG CTCCCCTGTT CAACCTCTCC TACCAAGCAT TGTACAAGCT CATAAAGAGG
CTTGGTAGAA AGACCGGGCT AACCTGGTTG AGGCCGCACG TACTCCGTCA CACGTTCGCC
ACCAACGCCA TAAGGAGAGG AGTTCCACTT CCTGCAGTGC AGAGGTTAAT GGGACACAAG
GACATCAAAA CTACGCAAAT CTACACGCAC TTGGTCACAG AGGACCTAGA GAACGCCTAT
AGGAGAGCCT TTGAGACTTA G
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| Protein sequence | MKLQLGEPPT DADPFIYFME SLKFSGAGQG TIKLYSTAIQ DFLQFVKKDP RSVTTQDVID
WIGSLNSRKG RSRVVDKRGR SATIRSYVIA VRRFLKWLGV NVKPPVPRIR SPERMALREE
DIVALLSACR RLRDKVIVSL LVDTGLRSSE LLSLRRSDVD LERMLIRVRE TKNGEERIVF
FTSRTATLLR QYLRKTQDKE SDDAPLFNLS YQALYKLIKR LGRKTGLTWL RPHVLRHTFA
TNAIRRGVPL PAVQRLMGHK DIKTTQIYTH LVTEDLENAY RRAFET
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