Gene Msed_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1618 
Symbol 
ID5103982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1564347 
End bp1564865 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content45% 
IMG OID640507508 
Productcarbonic anhydrase 
Protein accessionYP_001191697 
Protein GI146304381 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTG AAGAGTTTCT AGGTAAGAAA CCAAGGATAT CCCCTAAGGT CTACCTTCAC 
CCCACATCTT ATGTTATAGG GGATGTAACA ATAGGGGAAC TAACTAGCGT GTGGCATTAC
GCTGTTATAA GGGGCGACAA TGACAGTATA TCAATTGGAA AAAGAACAAA CATCCAAGAG
AACTGTTCCC TTCATACGGA CAAGGGATAC AAGATAGAGA TTGGCGACTT AGTGAGCGTA
GGCCATAACG CCGTGGTTCA CGGGGCAAGA ATAGGTAACA ACGTCATAGT GGGAATGGGA
GCAATCCTCC TAAACGGGGC CAAAATAGGG GATAACGTTA TCATTGGAGC AGGTGCGGTA
GTGACGGAGG GAAAGGAGAT ACCCTCCAAT AGCTTGGTCC TGGGAGTGCC AGCCAGAGTA
GTTAGAAAAC TTACCGAAGA GGAGATTCAC ATGATTGAGG CGAATGCAAT GGAATACGTT
GAAGAACTAT TAATAATGCT AGGAGAACAT AAGGCCTAA
 
Protein sequence
MPVEEFLGKK PRISPKVYLH PTSYVIGDVT IGELTSVWHY AVIRGDNDSI SIGKRTNIQE 
NCSLHTDKGY KIEIGDLVSV GHNAVVHGAR IGNNVIVGMG AILLNGAKIG DNVIIGAGAV
VTEGKEIPSN SLVLGVPARV VRKLTEEEIH MIEANAMEYV EELLIMLGEH KA