| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1597 |
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| Symbol | |
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| ID | 5103961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1543558 |
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| End bp | 1545381 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507486 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001191676 |
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| Protein GI | 146304360 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.10146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGTTG TTAAGCCAAG TCTAATGTTA GGCAATGAGG CCATAGCTTA CGGTGCTCTA
GCGTCCGGCG TTGCGGTTGC GGCAGGTTAC CCCGGAACTC CGTCGACCGA GATAATTGAG
ACCCTTATGA AGTTCAAGGA CGTTTACACA GAATGGAGTT CCAATGAGAA GGTGGCCTTT
GAGACAGGAT TCGGGGCTGC AATTATGGGT GCCCGGGCCC TGGTCACCAT GAAACACGTG
GGAATGAACG TTGCCTCAGA TTCGCTTATG TCGTCATCCT ACACGGGAGT ATCAGGGGCA
CTTGTGGTGG TCTCTGCAGG AGATCCAGGC ATGTGGTCTT CGCAGAGCGA ACAGGACACC
AGGTATTATG GGCTTATGGG TATGATTCCA GTCCTTGAGC CCTTCAATCC CCAATCTGCT
CATGACCTCA CAGTTGAGGC ATTTAACCTG AGCTCGGAGG TTGGTCATCC TGTCATTATT
TCCACAAATA CCAGGATTAG CCATGTTAGG TCACAGGTTA ATGTAATTCC CAGGAGGGAA
CCGGTCTATG GGAAATTCCA GAAAAACCCT GGAAGATACT CCCTTGTACC TGAGGTCTCC
AGAAGGGATA GGGAGGAACA ACTTAACAGA TGGGAGAAGA TCAAGTCGCT TACCGCCCAT
CTGGTGGAGT CTCGCGGGGA AGGTAAGGTG GCTGTTGTTG GGGTAGGAAT TTCATATTCT
TACGCCTTAG AGGCCTTGAG GGAACTTAAG GCTGAGCAAG TTAAGGTAAT AGGTGTATCC
TGCTCTGTAC CATTGCCTGA GAAGATTCTA GATTACCTTA CTGACGTCGA GAAAGTCCTT
GTGATTGAGG AGCTGGATCC TGTGGTGGAG AATCAGTTGA AATCCATGAT ACTTGACCAA
GGACTTCACG TTAAGGTGGA TGGAAAGAAA CTTACGGGAT ACGCGGGAGA AATGTCCCTC
GAAAGGGTAT CAAGAGCCAT AGCTAAATTC CTTGGTATTG AGGAGGAACC TCAACTGGAC
CAGATCCTAA AGGCCCCCGT AGATGTACCC AAGAGACCTC CCGCCATGTG TCCAGGTTGC
CCGCATAGGT CAAGCTTCTT CTTCCTCAAG AAGGGGCTAT CCCTGGGCGG GATCTCAAGC
ACCTTCTATT CTGGGGATAT AGGTTGCTAC TCATTGGGAG TACTCCCGCC TTTCAACGAG
CAAGATAGCT TGATATCCAT GGGAAGTAGT TTAGGAATAG CTAATGGAGT TTATAGGTCG
ACGCACACGA TCCCCGTGGC AATCATAGGA GATTCAACGT TCTTCCATAC AGGACTTCCA
GGCCTCGCAA ATGCCGTCTA TAACAAGTTC CCAGTTCTCG TGATCGTGTT AGATAATCGC
TCCACCGCCA TGACAGGCCA ACAGGGTAGC CCATCAACCA GTATTGATAT AGCGAACGTA
GCTAAGGGCC TAGGCGTTGA GTATGTGGAA GTTGGGGATC CCTTTAGTCC TGATTTTGCC
AAGGTTGTAG CTAGGGCATC TGAATGGGTA AAGAGGAATC AGGCACCAGC TGTCGTGGTG
GCGAAAAGGG CCTGTGCCCT CGAGGTCATA GATAGGGTAA AACCCGCACA GGTAGCCGTG
GTGAATTACG ATAAATGTAC AGGCTGTACG ATCTGCTATG ATTACTTTAC GTGTCCTGCA
ATCCTGAAAA GGAGTGACAA GAAGGCGGTA ATTAATCCTC AGGATTGTAT TGGGTGTGGC
GCATGCGTTC CCGTGTGCCC CTTTAACGCT ATCAAACTTG AGGGGGAGAA ACCTATGGGG
TGGGATGAGG CATGGACAAG CTAA
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| Protein sequence | MLVVKPSLML GNEAIAYGAL ASGVAVAAGY PGTPSTEIIE TLMKFKDVYT EWSSNEKVAF
ETGFGAAIMG ARALVTMKHV GMNVASDSLM SSSYTGVSGA LVVVSAGDPG MWSSQSEQDT
RYYGLMGMIP VLEPFNPQSA HDLTVEAFNL SSEVGHPVII STNTRISHVR SQVNVIPRRE
PVYGKFQKNP GRYSLVPEVS RRDREEQLNR WEKIKSLTAH LVESRGEGKV AVVGVGISYS
YALEALRELK AEQVKVIGVS CSVPLPEKIL DYLTDVEKVL VIEELDPVVE NQLKSMILDQ
GLHVKVDGKK LTGYAGEMSL ERVSRAIAKF LGIEEEPQLD QILKAPVDVP KRPPAMCPGC
PHRSSFFFLK KGLSLGGISS TFYSGDIGCY SLGVLPPFNE QDSLISMGSS LGIANGVYRS
THTIPVAIIG DSTFFHTGLP GLANAVYNKF PVLVIVLDNR STAMTGQQGS PSTSIDIANV
AKGLGVEYVE VGDPFSPDFA KVVARASEWV KRNQAPAVVV AKRACALEVI DRVKPAQVAV
VNYDKCTGCT ICYDYFTCPA ILKRSDKKAV INPQDCIGCG ACVPVCPFNA IKLEGEKPMG
WDEAWTS
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