Gene Msed_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1594 
Symbol 
ID5103958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1540502 
End bp1541032 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content45% 
IMG OID640507482 
ProductATP:cob(I)alamin adenosyltransferase 
Protein accessionYP_001191673 
Protein GI146304357 
COG category[S] Function unknown 
COG ID[COG2096] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00636] ATP:cob(I)alamin adenosyltransferase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0745617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGGGAA AGTGGTACAC GGGCACAGGT GATTCAGGTC TCACAAGGAT CCCATCCATA 
GGACAAGTCT GGAAAGACGA CAAGCTTGTG GAAGCGTTGG GCAACCTAGA CGAGTTAAAC
TCGGTCCTGG GGGTGGTGGT ATCCCTATAC CCTGAGCTAA GGGATCCAAT TCAAGATATA
CAGAGGGATA TCTTTGAGAT CTCTTCAGAA ATTGCTGGAT TTGACATGGG ATTTGAGAAG
GATAAAATCG AGAAGATAGA GAAATTAATT GATATCTACG GAAATCAGCT TGATCCCCTA
AAGAACTTCG TCTTACCCGG TGGGCATCTT GCCTCATCCT TTCTACATTT AGCCAGAGCT
GTGTGTAGGA GGGCAGAGAG AAGTGTAGTC AGTCTTTATC GAGAGAATAG AACCAGAGAG
AGCCACGTTA TTTACCTGAA TAGACTTTCA AGCTTACTAT TTGTTCTGGG ACTCTGGGTT
AACAAGAAGA CAGGAAACCA GGACGTGATC TGGAAAGGTA AAAGCAAATG A
 
Protein sequence
MSGKWYTGTG DSGLTRIPSI GQVWKDDKLV EALGNLDELN SVLGVVVSLY PELRDPIQDI 
QRDIFEISSE IAGFDMGFEK DKIEKIEKLI DIYGNQLDPL KNFVLPGGHL ASSFLHLARA
VCRRAERSVV SLYRENRTRE SHVIYLNRLS SLLFVLGLWV NKKTGNQDVI WKGKSK