| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1590 |
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| Symbol | |
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| ID | 5103954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1536899 |
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| End bp | 1538305 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640507477 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_001191669 |
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| Protein GI | 146304353 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00816719 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0063014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTATCGC CAGTAACGAC CAGGGACATT CCTCTCTATT CTCGTGGGTT CTTCATCTTT
ATAACAGGTA GTTACGTTAC TTACTGCATG AGAATTGCCA TTAATACTCA AACTCCTCCA
ATCCGTTTCA ACTTCACCTA CAAGGAACTC TTGGAGAGAT ATGGAGAAGT TCCAATCCCA
CTGGATCTGA GCTCACTTTC TGACCAAGAT TATCAGATCT CAGTGGGCGG AGTAGCTAGG
ATGATGATGT CCCTAGTCAA AACCTCAGGA TTTGAGAGGA GCAGATGGGT AGCCTTAGGA
CCTGGATACC CTCCTCAGGT TGTGCTGGAA GGAATAGATA TTCACTTCAT CGATTTACCT
CCAACTCTTC TATCCAGTTA CACCAGATTC AAGGAAGGAT TATACAATGA AGCTCACGGC
ATGTACAACT ATAATATCGT TGGCTCAGAC TACATAGCTT ATGCCTCCTA CAACTGGCAT
TCTGCCCTTA AACTCCTGGA ATTCTATTCT GATACAGACG TATATCTGAT AAATGATTTC
CAGCAGTTAC TCGTGGGAGG GATAATTGGC CCATCAGCTC CCGCAGTCCT ATGGTACCAT
ATTCCCTTTG TGCCAGAGAG GTTAAGTGAT AGGGTCAGAG AGTTCCTAGT TAGGGCATTT
GAGGGTTTCG ATCTGATCAT ATCCAGTACA AAACGTGACC TAGAGGGCTT AGTCAGATCA
GGTGCCAAGG TGAAAGCTAG ACAAATATAT CCCTTCATAG ATCCCTCAGC TTACTCCCAC
GTAAGCAAGA GCGAAGTCGA ATCTGTTTCA GAGAAATTTG GGATCAAAGA GGATGATAAG
GTAGTCCTGT TAGTGGGAAG AATGGACCCG ATAAAGAGTC AGGACATAGC GATTAAGGCT
ATCAAAAACA CCAACTTGAA GCTGGTAGTG GCAGGGAACG GAAGTTTCAC CAGTAAGAGC
CTTGGCCATG ATAAGGCTAG TATTTGGGCA AGAAAGCTAA GGGACTTAGT GGTGGAGCTA
GGAGTTCAGG ATAAGGTCAT TTTCACAGGA TATGTGAGCG ACCATGAACT AATGGCTTTA
TATCAAAGAA GCGACGTGGT CACTTTGACC TCAAGAAGCG AGGGGTTTGG GTTAACAATA
TGTGAAGCGT GGAATTACAA GAAGCCAGTG GTAGTAAGCG AGGGAGCCGG CGTAAGTGAG
TTGATCATAA ATGGGGTGAA TGGATACACT TTTTCGCCTG ATAAACCAGA TCAAATGTCA
TGGGCTTTGG TGGAAGCGGT AAAGAATTAC GACAAGTTAG GTCAAAGAGG TTATGAGACA
TTGCCACAAT GTTCCGTACA AACAGCGTCA GGAAAAGTAA AGGAAGCATT AGAGGAGGCT
CAAAGAGGTT ACATTCATAG CAAGTAA
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| Protein sequence | MLSPVTTRDI PLYSRGFFIF ITGSYVTYCM RIAINTQTPP IRFNFTYKEL LERYGEVPIP
LDLSSLSDQD YQISVGGVAR MMMSLVKTSG FERSRWVALG PGYPPQVVLE GIDIHFIDLP
PTLLSSYTRF KEGLYNEAHG MYNYNIVGSD YIAYASYNWH SALKLLEFYS DTDVYLINDF
QQLLVGGIIG PSAPAVLWYH IPFVPERLSD RVREFLVRAF EGFDLIISST KRDLEGLVRS
GAKVKARQIY PFIDPSAYSH VSKSEVESVS EKFGIKEDDK VVLLVGRMDP IKSQDIAIKA
IKNTNLKLVV AGNGSFTSKS LGHDKASIWA RKLRDLVVEL GVQDKVIFTG YVSDHELMAL
YQRSDVVTLT SRSEGFGLTI CEAWNYKKPV VVSEGAGVSE LIINGVNGYT FSPDKPDQMS
WALVEAVKNY DKLGQRGYET LPQCSVQTAS GKVKEALEEA QRGYIHSK
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