Gene Msed_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1588 
Symbol 
ID5104162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1535706 
End bp1536059 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content35% 
IMG OID640507475 
Producthypothetical protein 
Protein accessionYP_001191667 
Protein GI146304351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000641375 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0133655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAGA CTCTTCTTCA GATAGCTGAT GAACTGAATA AGGGAAATGT AACTAAGGCT 
GGTAAAATGA TCTTAGAATT AACGAAAGAG GAGGAAGATG AGAAAATACT TAGGGTTTCT
TCTGAAATAG AGAAAATACT CAGGGATCTA AATTCAAGAG AGTCGGTTCT AGATGAATTT
GAAGATGAAG ACTTGGAATT AAGGAGAATA GAAATGGAAA TGGATGATCT GAGAAAGAGA
AAGTTGAAAG TGCTATCAAT TTACGTTCTT AGAAAACTTA GCAAGGGAAA CATGATCATT
GAAAACATGA TAAGGAAATC TCCAATAGCT CAACAGCCCC AAACTTATAT GTGA
 
Protein sequence
MFETLLQIAD ELNKGNVTKA GKMILELTKE EEDEKILRVS SEIEKILRDL NSRESVLDEF 
EDEDLELRRI EMEMDDLRKR KLKVLSIYVL RKLSKGNMII ENMIRKSPIA QQPQTYM