Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1588 |
Symbol | |
ID | 5104162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1535706 |
End bp | 1536059 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640507475 |
Product | hypothetical protein |
Protein accession | YP_001191667 |
Protein GI | 146304351 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000641375 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0133655 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAGA CTCTTCTTCA GATAGCTGAT GAACTGAATA AGGGAAATGT AACTAAGGCT GGTAAAATGA TCTTAGAATT AACGAAAGAG GAGGAAGATG AGAAAATACT TAGGGTTTCT TCTGAAATAG AGAAAATACT CAGGGATCTA AATTCAAGAG AGTCGGTTCT AGATGAATTT GAAGATGAAG ACTTGGAATT AAGGAGAATA GAAATGGAAA TGGATGATCT GAGAAAGAGA AAGTTGAAAG TGCTATCAAT TTACGTTCTT AGAAAACTTA GCAAGGGAAA CATGATCATT GAAAACATGA TAAGGAAATC TCCAATAGCT CAACAGCCCC AAACTTATAT GTGA
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Protein sequence | MFETLLQIAD ELNKGNVTKA GKMILELTKE EEDEKILRVS SEIEKILRDL NSRESVLDEF EDEDLELRRI EMEMDDLRKR KLKVLSIYVL RKLSKGNMII ENMIRKSPIA QQPQTYM
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