| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1581 |
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| Symbol | |
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| ID | 5104026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1529339 |
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| End bp | 1530130 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507467 |
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| Product | succinyl-CoA synthetase (ADP-forming) alpha subunit |
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| Protein accession | YP_001191660 |
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| Protein GI | 146304344 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.144732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00457541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGATGCTGA AGTATGGAAC GAAGATTGTA GCTGGAGTCA CTCCGGGGAA AGGAGGAACC
CAGGTGAACG GAGTTCCGGT CTATGACACT GTCAAGGAAG CTGTCAAGGA GCATGAAATA
GATGCGTCAA TAATCTTCGT TCCTGCACGT TTCGCCAGTG AGGCCGTGTA TGAGGCAGTA
GATGCTGGGA TAAAGTTGGT CACGGTTATC ACAGAACACA TACCCGTCGT TGACGTGGCT
AAATTTGTTA GGTATGCTAG GGCTAGGGGT ACTAGGATAA TTGGACCTAA CTGCCCAGGG
CTCATAGTAC CTGGTGAGTC ATTGCTAGGA ATATTGCCAG CGAAATATTT CAGAAAAGGT
ACAGTGGGTA TAGTGTCCAG GTCTGGTACC CTAACCTACG AGGTATCCCA TCTTGTTGGG
GATCTGGGCC AGTCCACGGT CATAGGAATA GGGGGAGATC CCATAATTGG GACTCAGCTT
CAGGAGGTCG TTCAAGAGTT CGACAAGGAC AATAACACTG AGGCCATCGT GATCATAGGA
GAGATAGGGG GAACGATGGA GGAAAGGGTG GCACAACTGA AGAAGGAGGG AAAGATCAAG
AAACCCATCG TGGGTTATAT CGCCGGGCTA ACTGCCCCGA GGGAGAAAAG GATGGGTCAT
GCAGGGGCAG TGGTCTACAT GGGGATGGGA ACATTTGAAA GCAAGATAGA GGCATTCAAG
AAAGCCGATA TACCTGTGGC TAAGACACCG TATGAAATAA GAGATATCTT GACCAAAATA
GTGAGGAAAT GA
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| Protein sequence | MMLKYGTKIV AGVTPGKGGT QVNGVPVYDT VKEAVKEHEI DASIIFVPAR FASEAVYEAV
DAGIKLVTVI TEHIPVVDVA KFVRYARARG TRIIGPNCPG LIVPGESLLG ILPAKYFRKG
TVGIVSRSGT LTYEVSHLVG DLGQSTVIGI GGDPIIGTQL QEVVQEFDKD NNTEAIVIIG
EIGGTMEERV AQLKKEGKIK KPIVGYIAGL TAPREKRMGH AGAVVYMGMG TFESKIEAFK
KADIPVAKTP YEIRDILTKI VRK
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