| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1578 |
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| Symbol | |
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| ID | 5104023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1527694 |
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| End bp | 1528410 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507464 |
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| Product | purine phosphorylase family 1 |
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| Protein accession | YP_001191657 |
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| Protein GI | 146304341 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2820] Uridine phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00464289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACCCCG TACACATCCT CGCAAAGAAG GGAGACGTCG CAGAGAAGGT TTTAGTTGTA
GGAGATCCCG GAAGGGCGGA GCTACTCTCT TCATTGTTGG AGTCCCCCAA ACTGGTTAAC
AAGAACAGGG GCTTCCTAGT ATATACTGGT CTGTACCGTG ATACTAGGGT AAGCATTGCA
ACCCACGGTA TAGGAGGACC ATCAATGGCC ATAGTTTTTG AGGAGTTACA CATGCTAGGG
GGCAGTACAT TCGTTAGGCT CGGTACGGTC GGAGCACTGA GGCCCGAAAT AGGCCTAGGG
GAGTACATTA TCCCAACCGG AGCGTCGTAC AATCCAGGAG GACTTTTCTT CCAGTATGTG
GGAGATCTCA CATCAGTATC GGCGACCCCT GATCACGACC TTGTGTCTAG GCTGATTACG
CAGTTCTCCT CAGCTGGATA CAGATTCCAT GTTGGAAATA TTTTCAGTAG CGACGCATTT
TATGCTGAAG ATGAGCACTT CGTGAAGAGG TGGTCCGATA GGGGGAACAT TGGCGTGGAG
ATGGAATGTG CCACCCTCTT CTTCCTGAGT AGATTGAGGG GAACTAAGTC TGCCGCGGTG
GTGGTAGTAA GCGATAACCT AGCTACTGGC GGTAACTGGA TTTCCAAGGA GGACCTCGAA
AGAAGCGTTG TCAACGGTGC AAAATCGATT TTAACCGTAT TTTCGGAAAT GAAATAA
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| Protein sequence | MNPVHILAKK GDVAEKVLVV GDPGRAELLS SLLESPKLVN KNRGFLVYTG LYRDTRVSIA
THGIGGPSMA IVFEELHMLG GSTFVRLGTV GALRPEIGLG EYIIPTGASY NPGGLFFQYV
GDLTSVSATP DHDLVSRLIT QFSSAGYRFH VGNIFSSDAF YAEDEHFVKR WSDRGNIGVE
MECATLFFLS RLRGTKSAAV VVVSDNLATG GNWISKEDLE RSVVNGAKSI LTVFSEMK
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