| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1576 |
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| Symbol | |
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| ID | 5104021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1525466 |
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| End bp | 1526437 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640507462 |
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| Product | diphosphomevalonate decarboxylase |
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| Protein accession | YP_001191655 |
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| Protein GI | 146304339 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3407] Mevalonate pyrophosphate decarboxylase |
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| TIGRFAM ID | [TIGR01240] diphosphomevalonate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00467699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGAAGCTAG AAGCTGAGGC AGTAGCGCCA TCCAACATTG CCATAGTAAA GTACTGGGGA
AAAAGAGATA GGGAACTAAA CCTACCCTTA AACTCCTCCC TTTCCATATC CCTGGACTCA
CTGTGGGTTA GATCCAGGGT GATATTTGAT GAGTCCCTTG ATAAGGATGA GGTAATCATA
AACGGTAAAA GGTTAAGCGA AAACGAGGTA AGGGAGTACG CTGGAAGAGT CTTAAGGAGG
TTCAGGGACC TATACGGAAA AGAGTTATTT GCAAGGGTAG AGTCCACAAC CAATTTTCCC
AGCTCAGCTG GATTAGCGTC ATCAGCGGCA GGAATTGCAG CTCTGACCTA TGCCTCAAAT
GCAGCCTTGG GACTTGGATT AAGTAATCGA GAACTTTCCA AGATTGCCAG AGTTGGATCA
GGGAGTGCTT GCAGGAGTAT GTTCGGCGGA TTTGTAAAGT GGAATAGGGG TGAGCTAGAG
AGTGGAGATG ATTCTTTCTG CGAGGAAATT TTCCCTCCTG ATCATTGGCC AGATCTTGTG
GATATTATAC CTATTTTCGG AGAGGAGAAA AAGAAGGTGT CCTCGAGAAC GGGAATGGAG
AACACTGCTA CTAGTTCTGC TCTAATGAGA TGCAGACTTC AATTCATAGA GGAAACATTC
AACGAAGTCA TTGACGCTAT TAGAACTAAG AATGCGGGTA AGTTCTTTCA ACTAACAATG
AGACACAGCA ACAGTATGCA TGCAGTAATC CTAGATTCGT GGCCTCCCAT GAACTATCTT
AACGAGAAAT CGTTCAGGGT GATGGAATGG GTGGTTGAGT TCGGTAAGGC TGCATATACC
TTTGACGCTG GGCCTAATCC TCATATATTC GTACTGGAAA AGGACGTGGA TGAGGTCTTG
AAATTTTTAA ACGAAATTGG GAGCACGAAG ACCATTGTAA GCAGGGTAGG CAAAGGTCCC
TATCTGATCT AG
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| Protein sequence | MKLEAEAVAP SNIAIVKYWG KRDRELNLPL NSSLSISLDS LWVRSRVIFD ESLDKDEVII
NGKRLSENEV REYAGRVLRR FRDLYGKELF ARVESTTNFP SSAGLASSAA GIAALTYASN
AALGLGLSNR ELSKIARVGS GSACRSMFGG FVKWNRGELE SGDDSFCEEI FPPDHWPDLV
DIIPIFGEEK KKVSSRTGME NTATSSALMR CRLQFIEETF NEVIDAIRTK NAGKFFQLTM
RHSNSMHAVI LDSWPPMNYL NEKSFRVMEW VVEFGKAAYT FDAGPNPHIF VLEKDVDEVL
KFLNEIGSTK TIVSRVGKGP YLI
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