Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1562 |
Symbol | |
ID | 5104007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1518708 |
End bp | 1519127 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640507448 |
Product | CoA-binding domain-containing protein |
Protein accession | YP_001191641 |
Protein GI | 146304325 |
COG category | [R] General function prediction only |
COG ID | [COG1832] Predicted CoA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.477139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0705808 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAAA GCCAGATAAG ATATGTGTTA ACCAACTTCA AGAGAATCGC TACAATTGGA TTTTCCAAGG ATCCAGAGAA ACCATCGCAC AGGGTTCCCA AGTTTCTCAT GGAACATGGA TACGTAGTTT ACCCCGTGAA TCCCACTGTA ACAGAGATCC TCGGAAGGAA GTCCTATCCT TCACTCAAGG ATATCGAGGA TGAGATAGAA GTTGTTCAGG TGTTTAGGCC CTCAAAGGAT GTCCCTGTAA TTATTGACCA AGTACTGGAT AGGAAGAGGG AAAGAAATGA CGTAAAGGCG ATCTGGCTCC AAGAGGGAAT AAGGGATGAT AAATCCGCCG AGAGGGCCAG GGCCGAAGGT CTGATAGTTA TCCAGGATAA GTGCATGTAC AAGGAGTACG TAAAACTCTT TGGAGAATAA
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Protein sequence | MEESQIRYVL TNFKRIATIG FSKDPEKPSH RVPKFLMEHG YVVYPVNPTV TEILGRKSYP SLKDIEDEIE VVQVFRPSKD VPVIIDQVLD RKRERNDVKA IWLQEGIRDD KSAERARAEG LIVIQDKCMY KEYVKLFGE
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