| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1560 |
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| Symbol | |
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| ID | 5104005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1516878 |
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| End bp | 1517912 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507446 |
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| Product | biotin/lipoate A/B protein ligase |
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| Protein accession | YP_001191639 |
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| Protein GI | 146304323 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0095] Lipoate-protein ligase A |
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| TIGRFAM ID | [TIGR00545] lipoyltransferase and lipoate-protein ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0396798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAATT TTAGGTTTAT TGTAGAGAGG GGACCTCAGC ACAAGATCCT TGCCGGCGAG
GAGGCCCTAC TGGATTCCGT TGCTGAGGGA TCAGATCCCA TCCTCAGATT TGTAATCTTT
GATCCCACTG CTGTCCTCTT GGGATATCAC CAGTCTGCAG AGCAGGAGGT TAACTTGGAT
AAGGTAAGGG AGAGGGGATG GGATGTGGGT AGAAGACCTA CGGGCGGAGG AACAATTATC
ATGGGCCCCG ATCAGCTGGG CTGGGAGATA TATTCGGAGT CATCACTTTT GGGAGGCTCA
GTGGAATCGG CTATTAAGCG CTCGGCTGAC GCTGTCATAT CAACCCTCTC AAGGTTTGGG
ATCAAGGCTA ATTTCAGGCC TAAAAACGAC GTTGAAATAA ATGGTAGAAA GATTTCAGGT
TTGGGAGCGT TCTCCGTGGG GAAGTACATC TCGGTGACTG GAACTATTCT ACTGGACTTT
GATGTACAGG CCATGGTGGA TACGCTAAAG TTGAGCACCG AGAAGATGAA GGACAAGGTC
TCAAAGGACT TCAGGGAGAG AATAACCTGG TTAAATAGGG AACTGGGTTT CTCTGTTCCC
ATGGAGGAAC TCATAAAGGA GGCTAGATTA GCCTTTCAAG AGTCGCTTGG TGTGGAACTT
CTCGACGGGA AATACTTACC CAGAGAGGAA GAAAATATCA GGGAACTCGA GTTAAAGTAT
AGATCGCAGG AGTGGGTTTT CGGTCTAAGG AAAACCTTGG AAGGGGAGGA CGTTAGGCAG
GGAGAGATTA AGCTTCCGGG AGGGCTCTTC AGGGTTCAGG TTAAGATGGC GGGGAAGGGA
CTAATACAGT CGGTTCTAAT CACGGGAGAC TTCTTCGTTG AGCCTAGGAG GAGCATTTAC
GACCTTGAGG CTAGGTTGAA GTGGTCCAGG GTGGAGGACC TTAGGAAAGA GGTTTCGGAT
TGGTTTCAAG GGGTTAAGTT TCTAGGGGTG GACAAGGAGC AACTTATTCA ATTTCTGGAG
GGATTAGTGA GATGA
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| Protein sequence | MPNFRFIVER GPQHKILAGE EALLDSVAEG SDPILRFVIF DPTAVLLGYH QSAEQEVNLD
KVRERGWDVG RRPTGGGTII MGPDQLGWEI YSESSLLGGS VESAIKRSAD AVISTLSRFG
IKANFRPKND VEINGRKISG LGAFSVGKYI SVTGTILLDF DVQAMVDTLK LSTEKMKDKV
SKDFRERITW LNRELGFSVP MEELIKEARL AFQESLGVEL LDGKYLPREE ENIRELELKY
RSQEWVFGLR KTLEGEDVRQ GEIKLPGGLF RVQVKMAGKG LIQSVLITGD FFVEPRRSIY
DLEARLKWSR VEDLRKEVSD WFQGVKFLGV DKEQLIQFLE GLVR
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