| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1535 |
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| Symbol | |
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| ID | 5104063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1497408 |
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| End bp | 1497647 |
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| Gene Length | 240 bp |
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| Protein Length | 79 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507422 |
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| Product | AbrB family transcriptional regulator |
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| Protein accession | YP_001191615 |
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| Protein GI | 146304299 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.31901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0713691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTACTCA CGAAAGTCCA TAAGAAGGGG ATAGTGGTGA TTCCCAAGGA AATGAGGGAA
CTCCACAACA TAAGGGAAGG TGACGAGGTT ATGATCTACA GTGACGAATT CGGCGTGCAT
ATCCTTCCCA AGAAAACTCC TGAGGAGCTC TTTGGAATGG ACAAGGGACT GGGTTTGGAG
GAGCTAGCTA AGGAGCAAAT TAAGGAAAGG GAAGAGGAAC GTGCAAAGGT ACATTCTTGA
|
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| Protein sequence | MVLTKVHKKG IVVIPKEMRE LHNIREGDEV MIYSDEFGVH ILPKKTPEEL FGMDKGLGLE
ELAKEQIKER EEERAKVHS
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