| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1528 |
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| Symbol | |
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| ID | 5104056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1489135 |
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| End bp | 1490364 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640507415 |
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| Product | hypothetical protein |
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| Protein accession | YP_001191608 |
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| Protein GI | 146304292 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.275544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTTT CAGATGTTGT GAACTTTTCC TTTAAAGCCT TAACCTCGAA GAAGCTAAGA
ACGAGCTTAA CAATCTTAGG AATACTTATT GGGCCAGCTA TAGTTGTGGG ATTAACGGGT
CTAACCCTAG GATTTTCCTC GGTTCTAACT CATCAGCTCT TCTCCAGTCT ATCTCCTACC
GACATCTTTG TGACTCCGGG TACAAGCACA ATTACCCCCT ATACCATACA GGAGATATCA
CACATACCAG GAGTTAAGGC AGTAGTTCCG TTTTATCTTA TCTCTGGTAC AATTGAAACG
CCTAGTGGTC CTATGGCTAC AGAAATTCTC TCTATTAGCA CTAGCCAAGC TTCTGAGGTG
TTTCCTGGAC TAACCTTGCA GCAAGGTCAA TATCCCTCAC CCTACTCCTC ATATGGAGCA
GTAGTTGGTT ATTACATTGC ACATCCACAG TATCCAGGTC AGCCCACTTA TCAGGTAGGT
CAAACTATAA CCGTGGTGAT GAATACCCCA AACGGGAAAA TTACCAAGAC GTTCCTGGTC
ACTGGTAGTT TTAACGAGTT TAGTAGTGCC TTCGCGGATA TAGATAAGGC CTTAGTTGTG
CAGAATATAG TGGGCTCACA GTACTATGGG GATCAATACA GTGGTTTAAT AGTGGAGGCA
AGTAGTGTGT CACAGGTAAA CAATGTTGTA AATTCCATAC ATAACGAGCT CGGAAGATCA
GTAAGTGTTA CATCCGTGGA GCAGTTCATC ACTCTCATCA ATAACTCCCT ATCTGCGGTT
AATGGTCTTC TTTTCGTAGC AGGCGCATCG TCCTTCATTG TGGCCTTCGT GGGAATATTG
AGTACTATGT TTACCACAGT GGTGGAGCGA ACAAGGGAAA TAGGAGTTCT GAGGGCAATA
GGCTTCACCA GGAGAGGTAT AATGGTGATA TTCGTGACTG AGGCCATATT GATGGGCCTA
CTTGGAGGCA CAGCTGGAGT GGGTGCAGGG GTTGGGATGG GATACCTTCT TACCACACTT
ACCAATTCTG GAGGACCTGG GGCTGGAAGA GGAAGCGCTG CAGCGTCCGG TGGCCTCGGA
ATCAGCGCAC ATATTACTCC AGTATTTGAA CCAACATTCA TTGCGGAAGT GATACTTATA
ACAGTCATTT TCAGTCTCTT CGCAGGAATC ATCCCTGCAT ATAGGGCGTC CAGAATCGAA
CCAGCTGTGG CATTAAGATA TGAAGTGTAG
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| Protein sequence | MKLSDVVNFS FKALTSKKLR TSLTILGILI GPAIVVGLTG LTLGFSSVLT HQLFSSLSPT
DIFVTPGTST ITPYTIQEIS HIPGVKAVVP FYLISGTIET PSGPMATEIL SISTSQASEV
FPGLTLQQGQ YPSPYSSYGA VVGYYIAHPQ YPGQPTYQVG QTITVVMNTP NGKITKTFLV
TGSFNEFSSA FADIDKALVV QNIVGSQYYG DQYSGLIVEA SSVSQVNNVV NSIHNELGRS
VSVTSVEQFI TLINNSLSAV NGLLFVAGAS SFIVAFVGIL STMFTTVVER TREIGVLRAI
GFTRRGIMVI FVTEAILMGL LGGTAGVGAG VGMGYLLTTL TNSGGPGAGR GSAAASGGLG
ISAHITPVFE PTFIAEVILI TVIFSLFAGI IPAYRASRIE PAVALRYEV
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