| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1527 |
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| Symbol | |
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| ID | 5104055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1488497 |
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| End bp | 1489096 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507414 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_001191607 |
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| Protein GI | 146304291 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.578611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGAAAAG AACTTCTCAC TCCTGAAATT CCTGTCCTTG ATAAGCTGTC CATAAATCCA
TCAAAAAGTG CAGTGGTAGT CGTGGATATG CAAAATGATT TCGTCAGAAA AGAGGGGAAA
CTTTACGTTC CTGACGCCGA GTCCACCATC TCTCCCATAA GGCAGTTGAT ATCTAAGGCA
AGGGATTCGG GTGCCCACGT TATATACACT CAAGATTGGC ACCTTAAGGA CGATCCTGAG
TTTAAGATTT GGGGCGAGCA CGCCGTTGCC GGCTCCTGGG GAGCAGAAAT AGTAGACGAA
CTGAAGCCGG AAAAACATGA TTATGTCGTC AAAAAATTGA GATATGATGC GTTCTTTGGG
ACCTCCCTGG ATTACTACCT CCGGGTCAAG GGAATAGATA CGCTTGTGAT CACTGGAACG
GTGGCCAATA TCTGCGTTCT TCACACAGCT GGGAGCGCCG CATTGCGGTG GTACAACATC
GTTGTACCTA CTGACGGGAT ATCGGCCATA ACGGAATTCG ATTATTACGC TACCCTAAGG
CAAGTCGACT TCCTCTATAG AGGGAAGATA ACAACAACTC AAGGAATTAC TTTTAAGTAA
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| Protein sequence | MRKELLTPEI PVLDKLSINP SKSAVVVVDM QNDFVRKEGK LYVPDAESTI SPIRQLISKA
RDSGAHVIYT QDWHLKDDPE FKIWGEHAVA GSWGAEIVDE LKPEKHDYVV KKLRYDAFFG
TSLDYYLRVK GIDTLVITGT VANICVLHTA GSAALRWYNI VVPTDGISAI TEFDYYATLR
QVDFLYRGKI TTTQGITFK
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