| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1521 |
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| Symbol | |
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| ID | 5104049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1483060 |
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| End bp | 1483719 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640507408 |
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| Product | hypothetical protein |
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| Protein accession | YP_001191601 |
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| Protein GI | 146304285 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
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| TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.393422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.128307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAAAGT TCACCATTAA CAAAGAGGAG ATACTGTTTT CAAAAACCCT TGAAATGACT
AAGAACATCA ACGAAGCCAT TATGAGGTTA AACGAGCTTG TTAGGAAGGT AATAAGGGGA
GACAGGGAAG GCGTGATGTC GGAGGTCATC AGAATCAAGG CAATTTATGA GAGAGTGGCC
ATGGTCAGAG AGGAGATAGT TTCCATGCTT TACGGTGAGG CTTTCCTCCC AGATTTCAAG
GAGTCCATGA TGATGTTAAA TCAAGCACTT TATAACACTA TGAAGGCCAT CAAGGACTCG
GGGAGGGCAA TCTCTTCTAG GAAGCCCAAT GAAGGATTAC TGAAGGCCTT AAGTGACGGC
CTCTTAACCT ATCTTTCCAC GGTAATTGAG GGAGGAGAGA AGCTCACAGA GATGATCTCT
TACATGAAAA CAGACATGAA AGAGGCGATC AGGATCGGGA AGGAGATTCA GTTGCTAGAA
AGGAATGGAG ACGACATTAA GGACGTTCTC ATACAGAAGC TATACGACTC TGAGGGGATT
GCTGACGTCA TTAGCGTACT TCAGTTCAAG GACGTAATTA TCTTCATGGA TGATATTCTA
GATTACATGG AGGAGGCAAC ATTAAGTATA GAAACCCTAT ACGCCACCTT GAAGGCCTAA
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| Protein sequence | MIKFTINKEE ILFSKTLEMT KNINEAIMRL NELVRKVIRG DREGVMSEVI RIKAIYERVA
MVREEIVSML YGEAFLPDFK ESMMMLNQAL YNTMKAIKDS GRAISSRKPN EGLLKALSDG
LLTYLSTVIE GGEKLTEMIS YMKTDMKEAI RIGKEIQLLE RNGDDIKDVL IQKLYDSEGI
ADVISVLQFK DVIIFMDDIL DYMEEATLSI ETLYATLKA
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