Gene Msed_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1505 
Symbol 
ID5104034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1469781 
End bp1470227 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content44% 
IMG OID640507393 
Producthypothetical protein 
Protein accessionYP_001191586 
Protein GI146304270 
COG category[S] Function unknown 
COG ID[COG1673] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTT GGCTAGTACC GATACAAGAA GATATGTGGG ATAATATTCA GTATGACGGC 
GTGTATGGAT ATAAAACGAA CCTAAGTAAA TATATTAAGA AAGGCGATAA CATCATTTTC
TACGTGAGCA AGTATTATGC CACAAGGTAT GGCGGAAAGA TAGTGGGCAT TGGTAGAGTT
ATTTCAGATT GGTATTATGA CGAGACTCCA CTGTATCCTG AGGAGAAGGT GAGAAACAGA
GCAATCTTTC CCCATAGGGT AAAGGTGGAG GTATGGATAA CTGGGGCATG TGACGTAAAG
AGCCTAATCG GAAAGGTCAA GTTCGTGGAG GATGTGGTCC AGCTACCCAA GTACCTCAGG
AACGCACCGG CCAATCTGGG GAGACCAATT CTAGACTCGG ATGCGAAAGT AATGGAGGAA
TGCCTTAGAC AGACTATGTA CGACTGA
 
Protein sequence
MTFWLVPIQE DMWDNIQYDG VYGYKTNLSK YIKKGDNIIF YVSKYYATRY GGKIVGIGRV 
ISDWYYDETP LYPEEKVRNR AIFPHRVKVE VWITGACDVK SLIGKVKFVE DVVQLPKYLR
NAPANLGRPI LDSDAKVMEE CLRQTMYD