| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1494 |
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| Symbol | |
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| ID | 5104741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1459736 |
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| End bp | 1460782 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507382 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001191575 |
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| Protein GI | 146304259 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATC AGTTAAGCGA TCAACTCAAA AGGGCACTGG CTGACATAAA TTACCAGCGT
CCTACTAAGG TACAAGAGAT AGCCATCCCC GTCTTCATGA ATGGGGAGAG CGTAATAGTA
CAGGCAAAAA CAGGATCAGG AAAGACTGCG TCTTACCTGA TACCAGTCCT GGAGAGATAC
CACAACGCAC TCATTCTAGT TCCCACGAGG GAGCTGGCTG AGCAAGTTGC ATATGAGGCT
AAAAGACTTG GAAAATACAA GAGGACCTCT ATTGGGGTAA TCATAGGTGG AGTAGGTTAT
GACAGACAGG AGCGAGAGTC CGATAGTGAC ATCATAGTCG GAACTCCTGG AAGAATCCTT
GATTTGTGGG GCAGGGGTAC TCTTGACCTC TCCAGGTTTA AGCTGGCCAT CGTGGACGAG
GTTGATAGAA TGCTCGATAT GGGGTTCATT GACGACGTGA GAATGATACT CTCCAAGACC
AGTGCTGAGA ATTTCGGCTT CTTCTCTGCA ACAGTACCTC CAGAGGTCAA GGAGTTAGCT
GAGGAGTTCT CACCCAATGC TAGATTTCTC AAGGTTGATG AATATAAACC GGTTGAAATA
GATCACGAAT TTTATCCGGT CCGCGATAAC TGGCACGAGA AAGTAACCAA ACTGCTCAAG
GATGTAAATG GAAAGGCCAT AGTGTTCACC AACACAAAGG CTAGAGCAGA GGCATTGTAC
GACAATATCT CAGATAGGGT AAGCACATCA CTACTTCATG GCGATATGTC TCAGGGCTCA
AGGAGGAGAA ACCTGATGAG CTTTAAGAGA GGCGACAGTG ACATCCTAAT ATCCACAGAC
CTAGCAGCTA GGGGGATAGA TGTGATAGAT GTGGAGCAGG TAGTTAACTT TGACTTACCT
AGGGATGTTG AAACATATAT CCATAGGGTA GGAAGAACTG GGAGGATGGG AAGGAAAGGG
AGGGCAGTAT CATACTACAC GAGGAGAGAA GAGGAAATGG TCCAGAGGAT TAGAAGCATT
ATCAAATCAA CTATCATCTC TCAATGA
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| Protein sequence | MFDQLSDQLK RALADINYQR PTKVQEIAIP VFMNGESVIV QAKTGSGKTA SYLIPVLERY
HNALILVPTR ELAEQVAYEA KRLGKYKRTS IGVIIGGVGY DRQERESDSD IIVGTPGRIL
DLWGRGTLDL SRFKLAIVDE VDRMLDMGFI DDVRMILSKT SAENFGFFSA TVPPEVKELA
EEFSPNARFL KVDEYKPVEI DHEFYPVRDN WHEKVTKLLK DVNGKAIVFT NTKARAEALY
DNISDRVSTS LLHGDMSQGS RRRNLMSFKR GDSDILISTD LAARGIDVID VEQVVNFDLP
RDVETYIHRV GRTGRMGRKG RAVSYYTRRE EEMVQRIRSI IKSTIISQ
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