Gene Msed_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1490 
Symbol 
ID5104737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1456277 
End bp1456933 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content47% 
IMG OID640507378 
ProductFHA domain-containing protein 
Protein accessionYP_001191571 
Protein GI146304255 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATGGA AATGCACGGG ATGCGGAACA GAGAATCCTG ACGATGCAAT GTATTGCACC 
ACCTGTGGGT TAAAGAGACC TGACGAGCCA GTAGGAGCAC AATCTAGTTC ACAAGAACAG
CCAGCTGAAC AACAGGTACA AGAGCAACAA CAAGCGGTTC CTCCTGCCGA AACACAGGTC
CAGACTCAGG AGCCACCAGT CCAACAACCA GTGCAATCAG CAGAAGCGCA GTTAGTACAG
AGTTCAGCAC CCGCTAGTCC AACTCCTCAA GAGCAGGCAA GTACAACCCC ACAACCTCAA
GTTACGCAAC CACAACCCAG TAGCCAAGAG GGCAAATACT ATATTCAGTT CATTGCAACT
CCAGTCTCAG CCTTGAACAA GACGAAGGTT CCGCTAGATT TTGACGTATT CGAAAATATT
TCCTTAGGAA GGAGTCCTGA AAACGTATTG ATGATCCCAG ATAGCGAGAT TTCAAGGAGG
CATGCGATCC TATCTAAGGA AGGAGACACG CTTTACATAG AAGACCTAAA CAGCACCAAC
GGTACGTACA TCTATGACGG AAAGGTCTTT CAGACGGTAA AGGGGAAGGT CCAGCTTCCT
AAAAATGCGG TAGTGAAGCT TGGCAATAAC ACCATTATCA AGATTGTGAG AGAATGA
 
Protein sequence
MTWKCTGCGT ENPDDAMYCT TCGLKRPDEP VGAQSSSQEQ PAEQQVQEQQ QAVPPAETQV 
QTQEPPVQQP VQSAEAQLVQ SSAPASPTPQ EQASTTPQPQ VTQPQPSSQE GKYYIQFIAT
PVSALNKTKV PLDFDVFENI SLGRSPENVL MIPDSEISRR HAILSKEGDT LYIEDLNSTN
GTYIYDGKVF QTVKGKVQLP KNAVVKLGNN TIIKIVRE